Staphylococcus aureus subsp. aureus 68-397

Broad Institute

Genome Size: 2.8 megabases, Released Date: Aug. 21, 2009 #18416

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACJT01000001
166.2 KB
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whole genome shotgun sequence
NZ_ACJT01000002
179.5 KB
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whole genome shotgun sequence
NZ_ACJT01000003
2.8 KB
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whole genome shotgun sequence
NZ_ACJT01000004
104.5 KB
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whole genome shotgun sequence
NZ_ACJT01000005
74.1 KB
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whole genome shotgun sequence
NZ_ACJT01000006
61.1 KB
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whole genome shotgun sequence
NZ_ACJT01000007
193.9 KB
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whole genome shotgun sequence
NZ_ACJT01000008
88.9 KB
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whole genome shotgun sequence
NZ_ACJT01000009
30.6 KB
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whole genome shotgun sequence
NZ_ACJT01000010
21.0 KB
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whole genome shotgun sequence
NZ_ACJT01000011
60.9 KB
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whole genome shotgun sequence
NZ_ACJT01000012
37.9 KB
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whole genome shotgun sequence
NZ_ACJT01000013
1.7 KB
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whole genome shotgun sequence
NZ_ACJT01000014
3.0 KB
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whole genome shotgun sequence
NZ_ACJT01000015
50.9 KB
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whole genome shotgun sequence
NZ_ACJT01000016
3.6 KB
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whole genome shotgun sequence
NZ_ACJT01000017
3.6 KB
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whole genome shotgun sequence
NZ_ACJT01000018
107.8 KB
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whole genome shotgun sequence
NZ_ACJT01000019
40.8 KB
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whole genome shotgun sequence
NZ_ACJT01000020
81.3 KB
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whole genome shotgun sequence
NZ_ACJT01000021
97.2 KB
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whole genome shotgun sequence
NZ_ACJT01000022
22.3 KB
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whole genome shotgun sequence
NZ_ACJT01000023
5.2 KB
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whole genome shotgun sequence
NZ_ACJT01000024
128.9 KB
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whole genome shotgun sequence
NZ_ACJT01000025
41.7 KB
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whole genome shotgun sequence
NZ_ACJT01000026
30.6 KB
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whole genome shotgun sequence
NZ_ACJT01000027
63.3 KB
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whole genome shotgun sequence
NZ_ACJT01000028
70.8 KB
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whole genome shotgun sequence
NZ_ACJT01000029
2.5 KB
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whole genome shotgun sequence
NZ_ACJT01000030
1.5 KB
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whole genome shotgun sequence
NZ_ACJT01000031
53.5 KB
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whole genome shotgun sequence
NZ_ACJT01000032
8.2 KB
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whole genome shotgun sequence
NZ_ACJT01000033
50.4 KB
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whole genome shotgun sequence
NZ_ACJT01000034
10.3 KB
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whole genome shotgun sequence
NZ_ACJT01000035
25.1 KB
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whole genome shotgun sequence
NZ_ACJT01000036
61.3 KB
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whole genome shotgun sequence
NZ_ACJT01000037
4.2 KB
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whole genome shotgun sequence
NZ_ACJT01000038
805 bytes
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whole genome shotgun sequence
NZ_ACJT01000039
3.9 KB
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whole genome shotgun sequence
NZ_ACJT01000040
17.5 KB
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whole genome shotgun sequence
NZ_ACJT01000041
4.6 KB
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whole genome shotgun sequence
NZ_ACJT01000042
109.4 KB
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whole genome shotgun sequence
NZ_ACJT01000043
38.4 KB
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whole genome shotgun sequence
NZ_ACJT01000044
10.6 KB
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whole genome shotgun sequence
NZ_ACJT01000045
506 bytes
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whole genome shotgun sequence
NZ_ACJT01000046
187.6 KB
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whole genome shotgun sequence
NZ_ACJT01000047
34.3 KB
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whole genome shotgun sequence
NZ_ACJT01000048
87.2 KB
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whole genome shotgun sequence
NZ_ACJT01000049
3.3 KB
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whole genome shotgun sequence
NZ_ACJT01000050
13.5 KB
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whole genome shotgun sequence
NZ_ACJT01000051
7.9 KB
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whole genome shotgun sequence
NZ_ACJT01000052
3.9 KB
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whole genome shotgun sequence
NZ_ACJT01000053
49.6 KB
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whole genome shotgun sequence
NZ_ACJT01000054
25.9 KB
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whole genome shotgun sequence
NZ_ACJT01000055
80.2 KB
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whole genome shotgun sequence
NZ_ACJT01000056
809 bytes
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whole genome shotgun sequence
NZ_ACJT01000057
1004 bytes
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whole genome shotgun sequence
NZ_ACJT01000058
2.0 KB
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whole genome shotgun sequence
NZ_ACJT01000059
2.6 KB
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whole genome shotgun sequence
NZ_ACJT01000060
3.7 KB
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whole genome shotgun sequence
NZ_ACJT01000061
6.2 KB
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whole genome shotgun sequence
NZ_ACJT01000062
2.8 KB
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whole genome shotgun sequence
NZ_ACJT01000063
1.1 KB
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whole genome shotgun sequence
NZ_ACJT01000064
1.1 KB
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whole genome shotgun sequence
NZ_ACJT01000065
378 bytes
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whole genome shotgun sequence
NZ_ACJT01000066
739 bytes
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whole genome shotgun sequence
NZ_ACJT01000067
653 bytes
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whole genome shotgun sequence
NZ_ACJT01000068
6.5 KB
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whole genome shotgun sequence
NZ_ACJT01000069
509 bytes
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whole genome shotgun sequence
NZ_ACJT01000070
1.6 KB
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whole genome shotgun sequence
NZ_ACJT01000071
1.0 KB
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Taxonomy

External Links

Staphylococcus aureus subsp. aureus 68-397

Search Genome

Sequences

PubMed Search for Staphylococcus aureus subsp. aureus 68-397

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