Staphylococcus aureus subsp. aureus ATCC BAA-39

Baylor College of Medicine

Genome Size: 2.9 megabases, Released Date: Aug. 20, 2010 #20673

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00001, whole genome shotgun sequence
NZ_AEEK01000001
1.6 KB
1 CDS

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contig00007, whole genome shotgun sequence
NZ_AEEK01000002
4.4 KB
5 CDS

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contig00008, whole genome shotgun sequence
NZ_AEEK01000003
1.0 KB
2 CDS

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contig00009, whole genome shotgun sequence
NZ_AEEK01000004
1.2 KB
1 CDS

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contig00010, whole genome shotgun sequence
NZ_AEEK01000005
1.8 KB
1 CDS

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contig00013, whole genome shotgun sequence
NZ_AEEK01000006
1.0 KB
3 CDS

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contig00014, whole genome shotgun sequence
NZ_AEEK01000007
551 bytes
2 CDS

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contig00017, whole genome shotgun sequence
NZ_AEEK01000008
992 bytes
0 CDS

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contig00018, whole genome shotgun sequence
NZ_AEEK01000009
518 bytes
1 CDS

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contig00022, whole genome shotgun sequence
NZ_AEEK01000010
500 bytes
1 CDS

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contig00025, whole genome shotgun sequence
NZ_AEEK01000011
515 bytes
1 CDS

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contig00031, whole genome shotgun sequence
NZ_AEEK01000012
1.9 KB
2 CDS

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contig00032, whole genome shotgun sequence
NZ_AEEK01000013
938 bytes
1 CDS

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contig00040, whole genome shotgun sequence
NZ_AEEK01000014
743 bytes
1 CDS

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contig00044, whole genome shotgun sequence
NZ_AEEK01000015
1.4 KB
3 CDS

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contig00046, whole genome shotgun sequence
NZ_AEEK01000016
17.9 KB
18 CDS

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contig00047, whole genome shotgun sequence
NZ_AEEK01000017
26.5 KB
35 CDS

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contig00048, whole genome shotgun sequence
NZ_AEEK01000018
3.7 KB
10 CDS

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contig00049, whole genome shotgun sequence
NZ_AEEK01000019
69.8 KB
82 CDS

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contig00050, whole genome shotgun sequence
NZ_AEEK01000020
2.5 KB
3 CDS

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contig00051, whole genome shotgun sequence
NZ_AEEK01000021
22.4 KB
28 CDS

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contig00052, whole genome shotgun sequence
NZ_AEEK01000022
4.2 KB
10 CDS

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contig00053, whole genome shotgun sequence
NZ_AEEK01000023
11.4 KB
17 CDS

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contig00054, whole genome shotgun sequence
NZ_AEEK01000024
4.2 KB
4 CDS

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contig00055, whole genome shotgun sequence
NZ_AEEK01000025
10.2 KB
12 CDS

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contig00056, whole genome shotgun sequence
NZ_AEEK01000026
27.0 KB
27 CDS

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contig00057, whole genome shotgun sequence
NZ_AEEK01000027
71.4 KB
76 CDS

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contig00058, whole genome shotgun sequence
NZ_AEEK01000028
25.1 KB
22 CDS

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contig00059, whole genome shotgun sequence
NZ_AEEK01000029
9.8 KB
5 CDS

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contig00060, whole genome shotgun sequence
NZ_AEEK01000030
19.2 KB
17 CDS

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contig00061, whole genome shotgun sequence
NZ_AEEK01000031
130.7 KB
155 CDS

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contig00062, whole genome shotgun sequence
NZ_AEEK01000032
24.9 KB
30 CDS

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contig00063, whole genome shotgun sequence
NZ_AEEK01000033
136.3 KB
137 CDS

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contig00064, whole genome shotgun sequence
NZ_AEEK01000034
2.2 KB
2 CDS

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contig00065, whole genome shotgun sequence
NZ_AEEK01000035
72.8 KB
67 CDS

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contig00066, whole genome shotgun sequence
NZ_AEEK01000036
89.6 KB
92 CDS

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contig00067, whole genome shotgun sequence
NZ_AEEK01000037
143.5 KB
129 CDS

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contig00068, whole genome shotgun sequence
NZ_AEEK01000038
6.7 KB
9 CDS

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contig00069, whole genome shotgun sequence
NZ_AEEK01000039
6.8 KB
9 CDS

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contig00070, whole genome shotgun sequence
NZ_AEEK01000040
4.4 KB
3 CDS

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contig00071, whole genome shotgun sequence
NZ_AEEK01000041
6.6 KB
7 CDS

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contig00072, whole genome shotgun sequence
NZ_AEEK01000042
10.1 KB
12 CDS

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contig00073, whole genome shotgun sequence
NZ_AEEK01000043
40.5 KB
39 CDS

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contig00074, whole genome shotgun sequence
NZ_AEEK01000044
14.8 KB
13 CDS

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contig00075, whole genome shotgun sequence
NZ_AEEK01000045
14.7 KB
15 CDS

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contig00076, whole genome shotgun sequence
NZ_AEEK01000046
255.1 KB
238 CDS

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contig00077, whole genome shotgun sequence
NZ_AEEK01000047
23.2 KB
27 CDS

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contig00078, whole genome shotgun sequence
NZ_AEEK01000048
37.5 KB
39 CDS

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contig00079, whole genome shotgun sequence
NZ_AEEK01000049
51.6 KB
48 CDS

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contig00080, whole genome shotgun sequence
NZ_AEEK01000050
18.3 KB
23 CDS

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contig00081, whole genome shotgun sequence
NZ_AEEK01000051
19.7 KB
16 CDS

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contig00082, whole genome shotgun sequence
NZ_AEEK01000052
52.5 KB
57 CDS

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contig00083, whole genome shotgun sequence
NZ_AEEK01000053
18.6 KB
21 CDS

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contig00084, whole genome shotgun sequence
NZ_AEEK01000054
5.2 KB
4 CDS

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contig00085, whole genome shotgun sequence
NZ_AEEK01000055
17.1 KB
21 CDS

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contig00086, whole genome shotgun sequence
NZ_AEEK01000056
81.1 KB
65 CDS

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contig00087, whole genome shotgun sequence
NZ_AEEK01000057
3.2 KB
2 CDS

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contig00088, whole genome shotgun sequence
NZ_AEEK01000058
41.8 KB
35 CDS

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contig00089, whole genome shotgun sequence
NZ_AEEK01000059
23.4 KB
25 CDS

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contig00090, whole genome shotgun sequence
NZ_AEEK01000060
31.0 KB
34 CDS

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contig00091, whole genome shotgun sequence
NZ_AEEK01000061
92.0 KB
107 CDS

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contig00092, whole genome shotgun sequence
NZ_AEEK01000062
30.5 KB
32 CDS

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contig00093, whole genome shotgun sequence
NZ_AEEK01000063
37.3 KB
27 CDS

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contig00094, whole genome shotgun sequence
NZ_AEEK01000064
36.3 KB
20 CDS

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contig00095, whole genome shotgun sequence
NZ_AEEK01000065
12.9 KB
10 CDS

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contig00096, whole genome shotgun sequence
NZ_AEEK01000066
15.4 KB
16 CDS

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contig00097, whole genome shotgun sequence
NZ_AEEK01000067
85.1 KB
89 CDS

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contig00098, whole genome shotgun sequence
NZ_AEEK01000068
239.7 KB
235 CDS

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contig00099, whole genome shotgun sequence
NZ_AEEK01000069
73.6 KB
71 CDS

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contig00100, whole genome shotgun sequence
NZ_AEEK01000070
30.0 KB
29 CDS

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contig00101, whole genome shotgun sequence
NZ_AEEK01000071
167.1 KB
179 CDS

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contig00102, whole genome shotgun sequence
NZ_AEEK01000072
71.8 KB
79 CDS

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contig00103, whole genome shotgun sequence
NZ_AEEK01000073
67.4 KB
71 CDS

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contig00104, whole genome shotgun sequence
NZ_AEEK01000074
96.7 KB
92 CDS

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contig00105, whole genome shotgun sequence
NZ_AEEK01000075
1.6 KB
0 CDS

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contig00108, whole genome shotgun sequence
NZ_AEEK01000076
3.0 KB
0 CDS

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contig00110, whole genome shotgun sequence
NZ_AEEK01000077
1.3 KB
1 CDS

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contig00112, whole genome shotgun sequence
NZ_AEEK01000078
555 bytes
1 CDS

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contig00114, whole genome shotgun sequence
NZ_AEEK01000079
1.2 KB
0 CDS

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contig00116, whole genome shotgun sequence
NZ_AEEK01000080
4.3 KB
10 CDS

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contig00118, whole genome shotgun sequence
NZ_AEEK01000081
747 bytes
0 CDS

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contig00124, whole genome shotgun sequence
NZ_AEEK01000082
1.3 KB
1 CDS

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contig00132, whole genome shotgun sequence
NZ_AEEK01000083
607 bytes
1 CDS

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Taxonomy

External Links

Staphylococcus aureus subsp. aureus ATCC BAA-39

Search Genome

Sequences

PubMed Search for Staphylococcus aureus subsp. aureus ATCC BAA-39

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