Staphylococcus aureus subsp. aureus CGS03

Allegheny-Singer Research Institute (ASRI)

#20680

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

ctg00017, whole genome shotgun sequence
ABWY01000001
272.7 KB
272 CDS

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ctg00034, whole genome shotgun sequence
ABWY01000002
221.7 KB
240 CDS

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ctg00032, whole genome shotgun sequence
ABWY01000003
216.7 KB
213 CDS

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ctg00014, whole genome shotgun sequence
ABWY01000004
208.2 KB
218 CDS

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ctg00016, whole genome shotgun sequence
ABWY01000005
185.2 KB
164 CDS

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ctg00015, whole genome shotgun sequence
ABWY01000006
155.6 KB
170 CDS

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ctg00013, whole genome shotgun sequence
ABWY01000007
150.4 KB
177 CDS

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ctg00031, whole genome shotgun sequence
ABWY01000008
149.6 KB
180 CDS

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ctg00033, whole genome shotgun sequence
ABWY01000009
143.0 KB
129 CDS

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ctg00001, whole genome shotgun sequence
ABWY01000010
108.2 KB
115 CDS

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ctg00030, whole genome shotgun sequence
ABWY01000011
104.0 KB
127 CDS

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ctg00018, whole genome shotgun sequence
ABWY01000012
103.9 KB
85 CDS

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ctg00048, whole genome shotgun sequence
ABWY01000013
90.0 KB
92 CDS

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ctg00054, whole genome shotgun sequence
ABWY01000014
65.5 KB
95 CDS

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ctg00003, whole genome shotgun sequence
ABWY01000015
60.8 KB
74 CDS

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ctg00044, whole genome shotgun sequence
ABWY01000016
54.7 KB
47 CDS

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ctg00026, whole genome shotgun sequence
ABWY01000017
51.9 KB
57 CDS

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ctg00041, whole genome shotgun sequence
ABWY01000018
50.3 KB
58 CDS

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ctg00079, whole genome shotgun sequence
ABWY01000019
44.3 KB
44 CDS

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ctg00012, whole genome shotgun sequence
ABWY01000020
37.7 KB
42 CDS

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ctg00004, whole genome shotgun sequence
ABWY01000021
36.0 KB
40 CDS

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ctg00006, whole genome shotgun sequence
ABWY01000022
36.0 KB
42 CDS

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ctg00070, whole genome shotgun sequence
ABWY01000023
33.9 KB
27 CDS

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ctg00027, whole genome shotgun sequence
ABWY01000024
32.3 KB
33 CDS

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ctg00046, whole genome shotgun sequence
ABWY01000025
31.2 KB
36 CDS

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ctg00029, whole genome shotgun sequence
ABWY01000026
19.6 KB
20 CDS

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ctg00025, whole genome shotgun sequence
ABWY01000027
11.6 KB
15 CDS

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ctg00023, whole genome shotgun sequence
ABWY01000028
10.3 KB
26 CDS

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ctg00040, whole genome shotgun sequence
ABWY01000029
6.5 KB
7 CDS

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ctg00072, whole genome shotgun sequence
ABWY01000030
5.6 KB
2 CDS

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ctg00051, whole genome shotgun sequence
ABWY01000031
4.5 KB
5 CDS

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ctg00024, whole genome shotgun sequence
ABWY01000032
3.8 KB
9 CDS

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ctg00002, whole genome shotgun sequence
ABWY01000033
3.7 KB
2 CDS

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ctg00043, whole genome shotgun sequence
ABWY01000034
3.6 KB
2 CDS

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ctg00008, whole genome shotgun sequence
ABWY01000035
3.1 KB
8 CDS

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ctg00011, whole genome shotgun sequence
ABWY01000036
3.0 KB
6 CDS

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ctg00042, whole genome shotgun sequence
ABWY01000037
3.0 KB
0 CDS

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ctg00010, whole genome shotgun sequence
ABWY01000038
2.7 KB
3 CDS

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ctg00071, whole genome shotgun sequence
ABWY01000039
2.4 KB
6 CDS

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ctg00053, whole genome shotgun sequence
ABWY01000040
2.4 KB
0 CDS

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ctg00036, whole genome shotgun sequence
ABWY01000041
2.4 KB
5 CDS

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ctg00028, whole genome shotgun sequence
ABWY01000042
2.3 KB
4 CDS

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ctg00083, whole genome shotgun sequence
ABWY01000043
2.1 KB
7 CDS

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ctg00019, whole genome shotgun sequence
ABWY01000044
2.0 KB
3 CDS

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ctg00084, whole genome shotgun sequence
ABWY01000045
1.9 KB
8 CDS

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ctg00045, whole genome shotgun sequence
ABWY01000046
1.9 KB
7 CDS

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ctg00050, whole genome shotgun sequence
ABWY01000047
1.7 KB
0 CDS

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ctg00007, whole genome shotgun sequence
ABWY01000048
1.6 KB
2 CDS

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ctg00075, whole genome shotgun sequence
ABWY01000049
1.6 KB
2 CDS

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ctg00021, whole genome shotgun sequence
ABWY01000050
1.5 KB
8 CDS

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ctg00092, whole genome shotgun sequence
ABWY01000051
1.5 KB
4 CDS

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ctg00047, whole genome shotgun sequence
ABWY01000052
1.5 KB
1 CDS

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ctg00055, whole genome shotgun sequence
ABWY01000053
1.2 KB
2 CDS

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ctg00082, whole genome shotgun sequence
ABWY01000054
1.0 KB
1 CDS

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ctg00052, whole genome shotgun sequence
ABWY01000055
1.0 KB
1 CDS

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ctg00022, whole genome shotgun sequence
ABWY01000056
867 bytes
3 CDS

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ctg00059, whole genome shotgun sequence
ABWY01000057
825 bytes
3 CDS

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ctg00086, whole genome shotgun sequence
ABWY01000058
808 bytes
3 CDS

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ctg00090, whole genome shotgun sequence
ABWY01000059
807 bytes
3 CDS

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ctg00067, whole genome shotgun sequence
ABWY01000060
768 bytes
1 CDS

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ctg00037, whole genome shotgun sequence
ABWY01000061
768 bytes
1 CDS

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ctg00058, whole genome shotgun sequence
ABWY01000062
766 bytes
1 CDS

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ctg00020, whole genome shotgun sequence
ABWY01000063
766 bytes
1 CDS

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ctg00074, whole genome shotgun sequence
ABWY01000064
656 bytes
1 CDS

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ctg00085, whole genome shotgun sequence
ABWY01000065
648 bytes
2 CDS

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ctg00069, whole genome shotgun sequence
ABWY01000066
629 bytes
1 CDS

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ctg00009, whole genome shotgun sequence
ABWY01000067
501 bytes
1 CDS

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ctg00057, whole genome shotgun sequence
ABWY01000068
501 bytes
1 CDS

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Taxonomy

External Links

Staphylococcus aureus subsp. aureus CGS03

Search Genome

Sequences

PubMed Search for Staphylococcus aureus subsp. aureus CGS03

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