Staphylococcus epidermidis M23864:W1

Baylor College of Medicine

GC Content: 33.5%, Released Date: March 16, 2009 #18430

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACJB01000001
20.1 KB
22 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000002
7.5 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000003
38.2 KB
43 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000004
20.6 KB
18 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000005
38.5 KB
39 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000006
763 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000007
6.7 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000008
27.9 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000009
43.9 KB
48 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000010
37.0 KB
37 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000011
11.6 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000012
3.8 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000013
1.5 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000014
101.9 KB
123 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000015
6.0 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000016
10.8 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000017
17.4 KB
17 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000018
10.6 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000019
28.6 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000020
20.0 KB
20 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000021
95.3 KB
90 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000022
83.1 KB
83 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000023
125.2 KB
127 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000024
17.5 KB
16 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000025
4.0 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000026
50.1 KB
45 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000027
50.7 KB
52 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000028
37.4 KB
28 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000029
976 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000030
1.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000031
117.0 KB
97 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000032
70.0 KB
65 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000033
74.1 KB
73 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000034
305 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000035
237 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000036
205 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000037
798 bytes
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000038
335 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000039
254 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000040
456 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000041
743 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000042
4.7 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000043
603 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000044
263 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000045
55.3 KB
51 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000046
5.0 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000047
10.4 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000048
13.3 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000049
4.3 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000050
23.1 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000051
105.5 KB
108 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000052
52.7 KB
50 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000053
103.0 KB
122 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000054
79.7 KB
81 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000055
13.1 KB
23 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000056
7.5 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000057
3.4 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000058
7.9 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000059
70.8 KB
73 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000060
255.9 KB
274 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000061
116.9 KB
121 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000062
34.0 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000063
70.5 KB
56 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000064
116.5 KB
127 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000065
3.2 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000066
73.8 KB
67 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000067
41.6 KB
36 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000068
19.7 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000069
6.7 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000070
57.1 KB
58 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000071
1.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000072
3.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000073
801 bytes
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000074
308 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000075
523 bytes
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000076
528 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000077
3.4 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACJB01000078
517 bytes
1 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Staphylococcus epidermidis M23864:W1

Search Genome

Sequences

PubMed Search for Staphylococcus epidermidis M23864:W1

Related Genomes