Staphylococcus hominis SK119

J. Craig Venter Institute

GC Content: 31.3%, Released Date: April 29, 2009 #18432

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACLP01000001
88.2 KB
83 CDS

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whole genome shotgun sequence
NZ_ACLP01000002
2.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ACLP01000003
230.4 KB
233 CDS

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whole genome shotgun sequence
NZ_ACLP01000004
27.3 KB
28 CDS

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whole genome shotgun sequence
NZ_ACLP01000005
26.8 KB
24 CDS

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whole genome shotgun sequence
NZ_ACLP01000006
4.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACLP01000007
308.5 KB
324 CDS

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whole genome shotgun sequence
NZ_ACLP01000008
3.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ACLP01000009
78.3 KB
85 CDS

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whole genome shotgun sequence
NZ_ACLP01000010
160.2 KB
153 CDS

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whole genome shotgun sequence
NZ_ACLP01000011
50.9 KB
58 CDS

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whole genome shotgun sequence
NZ_ACLP01000012
94.6 KB
89 CDS

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whole genome shotgun sequence
NZ_ACLP01000013
50.3 KB
49 CDS

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whole genome shotgun sequence
NZ_ACLP01000014
35.5 KB
34 CDS

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whole genome shotgun sequence
NZ_ACLP01000015
21.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ACLP01000016
5.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACLP01000017
30.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ACLP01000018
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLP01000019
17.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ACLP01000020
386.4 KB
381 CDS

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whole genome shotgun sequence
NZ_ACLP01000021
34.6 KB
35 CDS

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whole genome shotgun sequence
NZ_ACLP01000022
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACLP01000023
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACLP01000024
19.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ACLP01000025
4.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ACLP01000026
8.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACLP01000027
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACLP01000028
62.3 KB
61 CDS

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whole genome shotgun sequence
NZ_ACLP01000029
20.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ACLP01000030
219.9 KB
223 CDS

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whole genome shotgun sequence
NZ_ACLP01000031
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLP01000032
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLP01000033
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACLP01000034
21.6 KB
25 CDS

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whole genome shotgun sequence
NZ_ACLP01000035
37.0 KB
37 CDS

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whole genome shotgun sequence
NZ_ACLP01000036
40.0 KB
41 CDS

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whole genome shotgun sequence
NZ_ACLP01000037
69.2 KB
74 CDS

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Taxonomy

External Links

Staphylococcus hominis SK119

Search Genome

Sequences

PubMed Search for Staphylococcus hominis SK119

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