Streptococcus mitis ATCC 6249

Baylor College of Medicine

Genome Size: 1.9 megabases, Released Date: Aug. 24, 2010 #20702

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00003, whole genome shotgun sequence
NZ_AEEN01000001
1.3 KB
1 CDS

Table view
Circular View
Artemis Viewer

contig00006, whole genome shotgun sequence
NZ_AEEN01000002
706 bytes
0 CDS

Table view
Circular View
Artemis Viewer

contig00011, whole genome shotgun sequence
NZ_AEEN01000003
1.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

contig00017, whole genome shotgun sequence
NZ_AEEN01000004
829 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00022, whole genome shotgun sequence
NZ_AEEN01000005
731 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00024, whole genome shotgun sequence
NZ_AEEN01000006
762 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00033, whole genome shotgun sequence
NZ_AEEN01000007
117.3 KB
127 CDS

Table view
Circular View
Artemis Viewer

contig00034, whole genome shotgun sequence
NZ_AEEN01000008
65.2 KB
62 CDS

Table view
Circular View
Artemis Viewer

contig00035, whole genome shotgun sequence
NZ_AEEN01000009
49.0 KB
38 CDS

Table view
Circular View
Artemis Viewer

contig00036, whole genome shotgun sequence
NZ_AEEN01000010
308.1 KB
288 CDS

Table view
Circular View
Artemis Viewer

contig00037, whole genome shotgun sequence
NZ_AEEN01000011
93.5 KB
83 CDS

Table view
Circular View
Artemis Viewer

contig00038, whole genome shotgun sequence
NZ_AEEN01000012
632.4 KB
634 CDS

Table view
Circular View
Artemis Viewer

contig00039, whole genome shotgun sequence
NZ_AEEN01000013
97.6 KB
99 CDS

Table view
Circular View
Artemis Viewer

contig00040, whole genome shotgun sequence
NZ_AEEN01000014
3.6 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00041, whole genome shotgun sequence
NZ_AEEN01000015
243.2 KB
233 CDS

Table view
Circular View
Artemis Viewer

contig00042, whole genome shotgun sequence
NZ_AEEN01000016
54.8 KB
63 CDS

Table view
Circular View
Artemis Viewer

contig00043, whole genome shotgun sequence
NZ_AEEN01000017
2.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00044, whole genome shotgun sequence
NZ_AEEN01000018
137.5 KB
116 CDS

Table view
Circular View
Artemis Viewer

contig00045, whole genome shotgun sequence
NZ_AEEN01000019
38.2 KB
41 CDS

Table view
Circular View
Artemis Viewer

contig00051, whole genome shotgun sequence
NZ_AEEN01000020
5.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Streptococcus mitis ATCC 6249

Search Genome

Sequences

PubMed Search for Streptococcus mitis ATCC 6249

Related Genomes