Streptococcus mitis SK597

University of Maryland

Genome Size: 2.0 megabases, Released Date: Sept. 24, 2010 #20706

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig100, whole genome shotgun sequence
NZ_AEDV01000001
33.4 KB
32 CDS

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contig101, whole genome shotgun sequence
NZ_AEDV01000002
8.2 KB
8 CDS

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contig102, whole genome shotgun sequence
NZ_AEDV01000003
21.1 KB
23 CDS

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contig10, whole genome shotgun sequence
NZ_AEDV01000004
15.0 KB
15 CDS

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contig11, whole genome shotgun sequence
NZ_AEDV01000005
5.8 KB
4 CDS

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contig12, whole genome shotgun sequence
NZ_AEDV01000006
19.3 KB
34 CDS

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contig13, whole genome shotgun sequence
NZ_AEDV01000007
47.2 KB
32 CDS

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contig14, whole genome shotgun sequence
NZ_AEDV01000008
2.6 KB
2 CDS

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contig15, whole genome shotgun sequence
NZ_AEDV01000009
3.6 KB
2 CDS

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contig16, whole genome shotgun sequence
NZ_AEDV01000010
22.4 KB
18 CDS

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contig17, whole genome shotgun sequence
NZ_AEDV01000011
34.4 KB
32 CDS

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contig18, whole genome shotgun sequence
NZ_AEDV01000012
45.6 KB
41 CDS

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contig19, whole genome shotgun sequence
NZ_AEDV01000013
16.4 KB
8 CDS

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contig1, whole genome shotgun sequence
NZ_AEDV01000014
4.9 KB
1 CDS

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contig20, whole genome shotgun sequence
NZ_AEDV01000015
2.4 KB
2 CDS

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contig21, whole genome shotgun sequence
NZ_AEDV01000016
46.7 KB
49 CDS

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contig22, whole genome shotgun sequence
NZ_AEDV01000017
22.6 KB
24 CDS

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contig23, whole genome shotgun sequence
NZ_AEDV01000018
57.2 KB
50 CDS

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contig24, whole genome shotgun sequence
NZ_AEDV01000019
1.4 KB
2 CDS

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contig26, whole genome shotgun sequence
NZ_AEDV01000020
15.3 KB
17 CDS

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contig27, whole genome shotgun sequence
NZ_AEDV01000021
4.4 KB
5 CDS

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contig28, whole genome shotgun sequence
NZ_AEDV01000022
16.5 KB
10 CDS

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contig29, whole genome shotgun sequence
NZ_AEDV01000023
14.2 KB
19 CDS

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contig2, whole genome shotgun sequence
NZ_AEDV01000024
16.0 KB
19 CDS

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contig30, whole genome shotgun sequence
NZ_AEDV01000025
38.1 KB
32 CDS

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contig31, whole genome shotgun sequence
NZ_AEDV01000026
18.9 KB
17 CDS

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contig32, whole genome shotgun sequence
NZ_AEDV01000027
34.8 KB
37 CDS

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contig33, whole genome shotgun sequence
NZ_AEDV01000028
9.6 KB
9 CDS

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contig34, whole genome shotgun sequence
NZ_AEDV01000029
8.8 KB
9 CDS

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contig35, whole genome shotgun sequence
NZ_AEDV01000030
30.8 KB
37 CDS

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contig36, whole genome shotgun sequence
NZ_AEDV01000031
2.1 KB
1 CDS

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contig37, whole genome shotgun sequence
NZ_AEDV01000032
9.8 KB
9 CDS

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contig39, whole genome shotgun sequence
NZ_AEDV01000033
30.1 KB
32 CDS

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contig3, whole genome shotgun sequence
NZ_AEDV01000034
14.5 KB
15 CDS

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contig40, whole genome shotgun sequence
NZ_AEDV01000035
27.0 KB
27 CDS

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contig41, whole genome shotgun sequence
NZ_AEDV01000036
30.7 KB
33 CDS

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contig42, whole genome shotgun sequence
NZ_AEDV01000037
9.1 KB
6 CDS

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contig43, whole genome shotgun sequence
NZ_AEDV01000038
19.5 KB
19 CDS

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contig44, whole genome shotgun sequence
NZ_AEDV01000039
59.0 KB
49 CDS

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contig45, whole genome shotgun sequence
NZ_AEDV01000040
31.8 KB
29 CDS

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contig46, whole genome shotgun sequence
NZ_AEDV01000041
22.9 KB
22 CDS

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contig47, whole genome shotgun sequence
NZ_AEDV01000042
4.4 KB
2 CDS

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contig48, whole genome shotgun sequence
NZ_AEDV01000043
42.6 KB
33 CDS

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contig49, whole genome shotgun sequence
NZ_AEDV01000044
67.0 KB
64 CDS

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contig4, whole genome shotgun sequence
NZ_AEDV01000045
2.0 KB
6 CDS

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contig51, whole genome shotgun sequence
NZ_AEDV01000046
1.1 KB
1 CDS

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contig52, whole genome shotgun sequence
NZ_AEDV01000047
24.3 KB
20 CDS

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contig53, whole genome shotgun sequence
NZ_AEDV01000048
28.6 KB
37 CDS

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contig54, whole genome shotgun sequence
NZ_AEDV01000049
4.8 KB
10 CDS

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contig55, whole genome shotgun sequence
NZ_AEDV01000050
3.5 KB
2 CDS

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contig56, whole genome shotgun sequence
NZ_AEDV01000051
8.4 KB
10 CDS

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contig57, whole genome shotgun sequence
NZ_AEDV01000052
18.6 KB
14 CDS

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contig58, whole genome shotgun sequence
NZ_AEDV01000053
11.8 KB
9 CDS

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contig59, whole genome shotgun sequence
NZ_AEDV01000054
11.5 KB
13 CDS

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contig5, whole genome shotgun sequence
NZ_AEDV01000055
28.4 KB
24 CDS

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contig60, whole genome shotgun sequence
NZ_AEDV01000056
4.2 KB
3 CDS

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contig61, whole genome shotgun sequence
NZ_AEDV01000057
2.4 KB
2 CDS

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contig62, whole genome shotgun sequence
NZ_AEDV01000058
20.9 KB
24 CDS

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contig63, whole genome shotgun sequence
NZ_AEDV01000059
9.9 KB
9 CDS

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contig64, whole genome shotgun sequence
NZ_AEDV01000060
10.4 KB
11 CDS

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contig65, whole genome shotgun sequence
NZ_AEDV01000061
9.4 KB
6 CDS

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contig66, whole genome shotgun sequence
NZ_AEDV01000062
3.2 KB
3 CDS

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contig67, whole genome shotgun sequence
NZ_AEDV01000063
15.0 KB
19 CDS

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contig68, whole genome shotgun sequence
NZ_AEDV01000064
11.3 KB
7 CDS

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contig69, whole genome shotgun sequence
NZ_AEDV01000065
39.2 KB
26 CDS

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contig6, whole genome shotgun sequence
NZ_AEDV01000066
10.9 KB
9 CDS

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contig70, whole genome shotgun sequence
NZ_AEDV01000067
1.6 KB
1 CDS

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contig71, whole genome shotgun sequence
NZ_AEDV01000068
20.0 KB
21 CDS

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contig72, whole genome shotgun sequence
NZ_AEDV01000069
14.7 KB
13 CDS

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contig73, whole genome shotgun sequence
NZ_AEDV01000070
7.9 KB
2 CDS

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contig74, whole genome shotgun sequence
NZ_AEDV01000071
8.4 KB
10 CDS

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contig75, whole genome shotgun sequence
NZ_AEDV01000072
5.2 KB
4 CDS

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contig76, whole genome shotgun sequence
NZ_AEDV01000073
75.0 KB
73 CDS

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contig77, whole genome shotgun sequence
NZ_AEDV01000074
8.8 KB
7 CDS

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contig78, whole genome shotgun sequence
NZ_AEDV01000075
3.6 KB
3 CDS

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contig79, whole genome shotgun sequence
NZ_AEDV01000076
26.2 KB
25 CDS

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contig7, whole genome shotgun sequence
NZ_AEDV01000077
5.5 KB
5 CDS

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contig80, whole genome shotgun sequence
NZ_AEDV01000078
28.2 KB
25 CDS

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contig81, whole genome shotgun sequence
NZ_AEDV01000079
4.7 KB
3 CDS

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contig82, whole genome shotgun sequence
NZ_AEDV01000080
23.6 KB
29 CDS

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contig83, whole genome shotgun sequence
NZ_AEDV01000081
49.4 KB
46 CDS

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contig84, whole genome shotgun sequence
NZ_AEDV01000082
18.9 KB
24 CDS

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contig86, whole genome shotgun sequence
NZ_AEDV01000083
72.0 KB
83 CDS

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contig87, whole genome shotgun sequence
NZ_AEDV01000084
17.2 KB
16 CDS

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contig88, whole genome shotgun sequence
NZ_AEDV01000085
9.3 KB
9 CDS

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contig89, whole genome shotgun sequence
NZ_AEDV01000086
13.4 KB
12 CDS

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contig8, whole genome shotgun sequence
NZ_AEDV01000087
7.7 KB
7 CDS

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contig90, whole genome shotgun sequence
NZ_AEDV01000088
18.4 KB
16 CDS

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contig91, whole genome shotgun sequence
NZ_AEDV01000089
48.4 KB
48 CDS

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contig92, whole genome shotgun sequence
NZ_AEDV01000090
53.0 KB
46 CDS

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contig93, whole genome shotgun sequence
NZ_AEDV01000091
10.3 KB
11 CDS

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contig94, whole genome shotgun sequence
NZ_AEDV01000092
16.0 KB
14 CDS

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contig95, whole genome shotgun sequence
NZ_AEDV01000093
4.6 KB
3 CDS

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contig96, whole genome shotgun sequence
NZ_AEDV01000094
24.2 KB
22 CDS

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contig97, whole genome shotgun sequence
NZ_AEDV01000095
11.7 KB
11 CDS

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contig98, whole genome shotgun sequence
NZ_AEDV01000096
14.3 KB
10 CDS

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contig99, whole genome shotgun sequence
NZ_AEDV01000097
62.3 KB
55 CDS

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contig9, whole genome shotgun sequence
NZ_AEDV01000098
8.2 KB
8 CDS

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contigB10, whole genome shotgun sequence
NZ_AEDV01000099
1.2 KB
2 CDS

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contigB11, whole genome shotgun sequence
NZ_AEDV01000100
2.9 KB
2 CDS

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contigB12, whole genome shotgun sequence
NZ_AEDV01000101
2.1 KB
2 CDS

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contigB14, whole genome shotgun sequence
NZ_AEDV01000102
1.1 KB
1 CDS

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contigB15, whole genome shotgun sequence
NZ_AEDV01000103
3.6 KB
1 CDS

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contigB16, whole genome shotgun sequence
NZ_AEDV01000104
4.8 KB
1 CDS

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contigB17, whole genome shotgun sequence
NZ_AEDV01000105
942 bytes
1 CDS

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contigB1, whole genome shotgun sequence
NZ_AEDV01000106
852 bytes
1 CDS

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contigB3, whole genome shotgun sequence
NZ_AEDV01000107
2.2 KB
1 CDS

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contigB5, whole genome shotgun sequence
NZ_AEDV01000108
1.8 KB
1 CDS

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Taxonomy

External Links

Streptococcus mitis SK597

Search Genome

Sequences

PubMed Search for Streptococcus mitis SK597

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