Streptococcus pneumoniae CDC1087-00

J. Craig Venter Institute

GC Content: 39.8%, Released Date: Sept. 20, 2007 #18444

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABFT01000001
249.1 KB
205 CDS

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whole genome shotgun sequence
NZ_ABFT01000002
172.4 KB
156 CDS

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whole genome shotgun sequence
NZ_ABFT01000003
123.7 KB
107 CDS

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whole genome shotgun sequence
NZ_ABFT01000004
110.4 KB
104 CDS

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whole genome shotgun sequence
NZ_ABFT01000005
97.1 KB
79 CDS

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whole genome shotgun sequence
NZ_ABFT01000006
88.5 KB
94 CDS

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whole genome shotgun sequence
NZ_ABFT01000007
83.4 KB
60 CDS

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whole genome shotgun sequence
NZ_ABFT01000008
77.5 KB
70 CDS

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whole genome shotgun sequence
NZ_ABFT01000009
73.2 KB
58 CDS

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whole genome shotgun sequence
NZ_ABFT01000010
72.8 KB
58 CDS

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whole genome shotgun sequence
NZ_ABFT01000011
66.9 KB
64 CDS

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whole genome shotgun sequence
NZ_ABFT01000012
66.9 KB
55 CDS

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whole genome shotgun sequence
NZ_ABFT01000013
55.9 KB
43 CDS

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whole genome shotgun sequence
NZ_ABFT01000014
54.9 KB
44 CDS

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whole genome shotgun sequence
NZ_ABFT01000015
54.6 KB
47 CDS

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whole genome shotgun sequence
NZ_ABFT01000016
53.7 KB
43 CDS

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whole genome shotgun sequence
NZ_ABFT01000017
51.2 KB
45 CDS

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whole genome shotgun sequence
NZ_ABFT01000018
47.9 KB
29 CDS

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whole genome shotgun sequence
NZ_ABFT01000019
47.0 KB
40 CDS

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whole genome shotgun sequence
NZ_ABFT01000020
42.4 KB
31 CDS

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whole genome shotgun sequence
NZ_ABFT01000021
41.3 KB
29 CDS

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whole genome shotgun sequence
NZ_ABFT01000022
40.2 KB
37 CDS

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whole genome shotgun sequence
NZ_ABFT01000023
35.6 KB
30 CDS

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whole genome shotgun sequence
NZ_ABFT01000024
29.7 KB
26 CDS

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whole genome shotgun sequence
NZ_ABFT01000025
28.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ABFT01000026
27.7 KB
22 CDS

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whole genome shotgun sequence
NZ_ABFT01000027
22.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ABFT01000028
21.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ABFT01000029
20.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ABFT01000030
19.7 KB
21 CDS

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whole genome shotgun sequence
NZ_ABFT01000031
17.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ABFT01000032
17.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ABFT01000033
13.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ABFT01000034
9.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFT01000035
9.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABFT01000036
8.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABFT01000037
7.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ABFT01000038
7.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABFT01000039
6.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABFT01000040
5.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABFT01000041
5.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABFT01000042
4.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABFT01000043
4.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABFT01000044
4.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFT01000045
4.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFT01000046
3.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000047
3.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABFT01000048
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000049
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFT01000050
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000051
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFT01000052
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000053
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000054
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000055
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000056
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000057
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000058
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFT01000059
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000060
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000061
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000062
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000063
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000064
1012 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000065
996 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000066
942 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000067
798 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000068
735 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000069
710 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000070
600 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000071
535 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000072
503 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000073
299 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000074
277 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFT01000075
267 bytes
0 CDS

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Taxonomy

External Links

Streptococcus pneumoniae CDC1087-00

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae CDC1087-00

Related Genomes