| Type | Gene | Protein id | Locus | Product | Start pos | End pos | Strand |
|---|---|---|---|---|---|---|---|
| CDS | dnaA | YP_001693435.1 | SPH_0001 | chromosomal replication initiation protein | 197 | 1558 | 1 |
| CDS | dnaN | YP_001693436.1 | SPH_0002 | DNA polymerase III subunit beta | 1717 | 2853 | 1 |
| CDS | - | YP_001693437.1 | SPH_0003 | hypothetical protein | 2918 | 3112 | 1 |
| CDS | ychF | YP_001693438.1 | SPH_0004 | GTP-dependent nucleic acid-binding protein EngD | 3196 | 4311 | 1 |
| CDS | pth | YP_001693439.1 | SPH_0005 | peptidyl-tRNA hydrolase | 4382 | 4951 | 1 |
| CDS | mfd | YP_001693440.1 | SPH_0006 | transcription-repair coupling factor | 4952 | 8461 | 1 |
| CDS | - | YP_001693441.1 | SPH_0007 | ribosome-associated heat shock protein implicated in the recycling of the 50S subunit | 8519 | 8785 | 1 |
| CDS | - | YP_001693442.1 | SPH_0008 | septum formation initiator | 8778 | 9146 | 1 |
| CDS | - | YP_001693443.1 | SPH_0009 | hypothetical protein | 9151 | 9273 | 1 |
| CDS | - | YP_001693444.1 | SPH_0010 | beta-lactamase class A | 9266 | 10534 | 1 |
| CDS | - | YP_001693445.1 | SPH_0011 | tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) | 10531 | 11808 | 1 |
| CDS | hpt | YP_001693446.1 | SPH_0012 | hypoxanthine phosphoribosyltransferase | 11812 | 12354 | 1 |
| CDS | hflB | YP_001693447.1 | SPH_0013 | ATP-dependent metallopeptidase HflB | 12370 | 14328 | 1 |
| CDS | - | YP_001693448.1 | SPH_0014 | competence-specific global transcription modulator | 14450 | 14929 | 1 |
| tRNA | - | - | SPH_0015 | tRNA-Glu | 15023 | 15097 | 1 |
| rRNA | rrs1 | - | SPH_0016 | 16S ribosomal RNA | 15372 | 16805 | 1 |
| tRNA | - | - | SPH_0017 | tRNA-Ala | 16943 | 17020 | 1 |
| rRNA | rrl1 | - | SPH_0019 | 23S ribosomal RNA | 17141 | 20042 | 1 |
| rRNA | rrf | - | SPH_0020 | 5S ribosomal RNA | 20119 | 20234 | 1 |
| tRNA | - | - | SPH_0021 | tRNA-Asn | 20240 | 20316 | 1 |
| CDS | - | YP_001693449.1 | SPH_0024 | hypothetical protein | 21502 | 21738 | 1 |
| CDS | purA | YP_001693450.1 | SPH_0025 | adenylosuccinate synthetase | 21927 | 23255 | 1 |
| CDS | - | YP_001693451.1 | SPH_0026 | integrase | 23497 | 24645 | -1 |
| CDS | - | YP_001693452.1 | SPH_0028 | hypothetical protein | 24816 | 25616 | -1 |
| CDS | - | YP_001693453.1 | SPH_0029 | phage transcriptional repressor | 25743 | 26498 | -1 |
| CDS | - | YP_001693454.1 | SPH_0030 | hypothetical protein | 26672 | 26878 | 1 |
| CDS | - | YP_001693455.1 | SPH_0031 | hypothetical protein | 26949 | 27083 | 1 |
| CDS | - | YP_001693456.1 | SPH_0033 | hypothetical protein | 27095 | 27223 | 1 |
| CDS | - | YP_001693457.1 | SPH_0032 | hypothetical protein | 27186 | 27863 | -1 |
| CDS | - | YP_001693458.1 | SPH_0034 | hypothetical protein | 27918 | 28631 | 1 |
| CDS | - | YP_001693459.1 | SPH_0035 | phage protein | 28644 | 28901 | 1 |
| CDS | - | YP_001693460.1 | SPH_0036 | hypothetical protein | 28987 | 29307 | 1 |
| CDS | - | YP_001693461.1 | SPH_0037 | hypothetical protein | 29323 | 29616 | 1 |
| CDS | - | YP_001693462.1 | SPH_0038 | hypothetical protein | 29600 | 30448 | 1 |
| CDS | - | YP_001693463.1 | SPH_0039 | hypothetical protein | 30436 | 30594 | 1 |
| CDS | - | YP_001693464.1 | SPH_0040 | hypothetical protein | 30588 | 31358 | 1 |
| CDS | - | YP_001693465.1 | SPH_0041 | hypothetical protein | 31373 | 31567 | 1 |
| CDS | - | YP_001693466.1 | SPH_0042 | hypothetical protein | 31567 | 31794 | 1 |
| CDS | - | YP_001693467.1 | SPH_0043 | hypothetical protein | 31979 | 32170 | 1 |
| CDS | - | YP_001693468.1 | SPH_0044 | hypothetical protein | 32160 | 32492 | 1 |
| CDS | - | YP_001693469.1 | SPH_0045 | hypothetical protein | 32532 | 32996 | 1 |
| CDS | - | YP_001693470.1 | SPH_0046 | prophage LambdaSa2, site-specific recombinase phage integrase family protein | 33105 | 33647 | 1 |
| CDS | - | YP_001693471.1 | SPH_0047 | HNH endonuclease domain-containing protein | 34077 | 34394 | 1 |
| CDS | - | YP_001693472.1 | SPH_0048 | hypothetical protein | 34537 | 35016 | 1 |
| CDS | - | YP_001693473.1 | SPH_0049 | putative phage terminase, large subunit | 35009 | 36721 | 1 |
| CDS | - | YP_001693474.1 | SPH_0050 | hypothetical protein | 36946 | 37872 | 1 |
| CDS | - | YP_001693475.1 | SPH_0051 | HK97 family phage prohead protease | 37919 | 38461 | 1 |
| CDS | - | YP_001693476.1 | SPH_0052 | hypothetical protein | 38476 | 39729 | 1 |
| CDS | - | YP_001693477.1 | SPH_0053 | hypothetical protein | 39755 | 40090 | 1 |
| CDS | - | YP_001693478.1 | SPH_0054 | phage head-tail adaptor, putative | 40087 | 40392 | 1 |
| CDS | - | YP_001693479.1 | SPH_0055 | hypothetical protein | 40392 | 40739 | 1 |
| CDS | - | YP_001693480.1 | SPH_0056 | hypothetical protein | 40726 | 41070 | 1 |
| CDS | - | YP_001693481.1 | SPH_0057 | phi13 family phage major tail protein | 41084 | 41752 | 1 |
| CDS | - | YP_001693482.1 | SPH_0058 | hypothetical protein | 41754 | 42230 | 1 |
| CDS | - | YP_001693483.1 | SPH_0059 | hypothetical protein | 42269 | 42397 | 1 |
| CDS | - | YP_001693484.1 | SPH_0060 | prophage LambdaSa04, tail tape measure family protein | 42417 | 45155 | 1 |
| CDS | - | YP_001693485.1 | SPH_0061 | hypothetical protein | 45152 | 45874 | 1 |
| CDS | - | YP_001693486.1 | SPH_0062 | hypothetical protein | 45875 | 54991 | 1 |
| CDS | - | YP_001693487.1 | SPH_0063 | hypothetical protein | 55085 | 55288 | 1 |
| CDS | - | YP_001693488.1 | SPH_0064 | hypothetical protein | 55291 | 55641 | 1 |
| CDS | - | YP_001693489.1 | SPH_0065 | putative holin 1 | 55651 | 56067 | 1 |
| CDS | - | YP_001693490.1 | SPH_0066 | phage holin | 56071 | 56403 | 1 |
| CDS | - | YP_001693491.1 | SPH_0067 | lytic amidase (N-acetylmuramoyl-L-alanine amidase) | 56407 | 57363 | 1 |
| CDS | - | YP_001693492.1 | SPH_0068 | hypothetical protein | 57526 | 57681 | -1 |
| CDS | - | YP_001693493.1 | SPH_0069 | tRNA-specific adenosine deaminase | 58253 | 58720 | 1 |
| CDS | - | YP_001693494.1 | SPH_0070 | integrase | 58929 | 60071 | -1 |
| CDS | - | YP_001693495.1 | SPH_0071 | hypothetical protein | 60190 | 60540 | -1 |
| CDS | - | YP_001693496.1 | SPH_0072 | hypothetical protein | 60554 | 60934 | -1 |
| CDS | - | YP_001693497.1 | SPH_0073 | repressor protein | 60956 | 61312 | -1 |
| CDS | - | YP_001693498.1 | SPH_0074 | repressor | 61588 | 61773 | 1 |
| CDS | - | YP_001693499.1 | SPH_0075 | phage antirepressor protein | 61775 | 62473 | 1 |
| CDS | - | YP_001693500.1 | SPH_0076 | phage replication protein | 62659 | 63000 | 1 |
| CDS | - | YP_001693501.1 | SPH_0077 | hypothetical protein | 63157 | 63423 | 1 |
| CDS | - | YP_001693502.1 | SPH_0078 | hypothetical protein | 63507 | 63959 | 1 |
| CDS | - | YP_001693503.1 | SPH_0079 | putative Erf protein | 63965 | 64666 | 1 |
| CDS | - | YP_001693504.1 | SPH_0080 | hypothetical protein | 64669 | 65661 | 1 |
| CDS | - | YP_001693505.1 | SPH_0081 | hypothetical protein | 65683 | 65859 | 1 |
| CDS | - | YP_001693506.1 | SPH_0082 | single-stranded DNA-binding protein (SSB) (helix-destabilizingprotein) | 65849 | 66394 | 1 |
| CDS | - | YP_001693507.1 | SPH_0083 | hypothetical protein | 66420 | 67187 | 1 |
| CDS | - | YP_001693508.1 | SPH_0084 | hypothetical protein | 67192 | 67560 | 1 |
| CDS | - | YP_001693509.1 | SPH_0085 | hypothetical protein | 67595 | 67798 | 1 |
| CDS | - | YP_001693510.1 | SPH_0086 | hypothetical protein | 67852 | 68286 | 1 |
| CDS | - | YP_001693511.1 | SPH_0087 | hypothetical protein | 68288 | 69025 | 1 |
| CDS | - | YP_001693512.1 | SPH_0088 | hypothetical protein | 69042 | 69254 | 1 |
| CDS | - | YP_001693513.1 | SPH_0089 | RUS | 69508 | 69666 | 1 |
| CDS | - | YP_001693514.1 | SPH_0090 | hypothetical protein | 69668 | 69874 | 1 |
| CDS | - | YP_001693515.1 | SPH_0091 | hypothetical protein | 69924 | 70238 | 1 |
| CDS | - | YP_001693516.1 | SPH_0092 | hypothetical protein | 70240 | 70740 | 1 |
| CDS | - | YP_001693517.1 | SPH_0093 | hypothetical protein | 70740 | 71033 | 1 |
| CDS | - | YP_001693518.1 | SPH_0094 | hypothetical protein | 71033 | 71425 | 1 |
| CDS | - | YP_001693519.1 | SPH_0095 | hypothetical protein | 71497 | 72585 | 1 |
| CDS | - | YP_001693520.1 | SPH_0097 | hypothetical protein | 72566 | 73312 | 1 |
| CDS | - | YP_001693521.1 | SPH_0096 | hypothetical protein | 73278 | 73454 | -1 |
| CDS | - | YP_001693522.1 | SPH_0098 | hypothetical protein | 73516 | 73974 | 1 |
| CDS | - | YP_001693523.1 | SPH_0099 | PBSX family phage terminase large subunit | 73964 | 75274 | 1 |
| CDS | - | YP_001693524.1 | SPH_0100 | phage minor capsid protein | 75287 | 76855 | 1 |
| CDS | - | YP_001693525.1 | SPH_0101 | hypothetical protein | 76842 | 77015 | 1 |
| CDS | - | YP_001693526.1 | SPH_0102 | phage minor capsid protein 2 | 77058 | 78209 | 1 |
| CDS | - | YP_001693527.1 | SPH_0103 | phage minor structural protein GP20 | 78348 | 78911 | 1 |
| CDS | - | YP_001693528.1 | SPH_0104 | major capsid protein | 78929 | 79810 | 1 |