Streptococcus pneumoniae SP11-BS70

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.7%, Released Date: May 18, 2007 #18448

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAC01000001
422.1 KB
490 CDS

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whole genome shotgun sequence
NZ_ABAC01000002
276.1 KB
320 CDS

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whole genome shotgun sequence
NZ_ABAC01000003
224.0 KB
275 CDS

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whole genome shotgun sequence
NZ_ABAC01000004
201.5 KB
239 CDS

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whole genome shotgun sequence
NZ_ABAC01000005
187.5 KB
198 CDS

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whole genome shotgun sequence
NZ_ABAC01000006
101.5 KB
124 CDS

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whole genome shotgun sequence
NZ_ABAC01000007
88.9 KB
94 CDS

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whole genome shotgun sequence
NZ_ABAC01000008
84.6 KB
108 CDS

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whole genome shotgun sequence
NZ_ABAC01000009
69.2 KB
85 CDS

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whole genome shotgun sequence
NZ_ABAC01000010
64.7 KB
74 CDS

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whole genome shotgun sequence
NZ_ABAC01000011
61.9 KB
67 CDS

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whole genome shotgun sequence
NZ_ABAC01000012
58.4 KB
64 CDS

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whole genome shotgun sequence
NZ_ABAC01000013
50.5 KB
68 CDS

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whole genome shotgun sequence
NZ_ABAC01000014
35.6 KB
47 CDS

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whole genome shotgun sequence
NZ_ABAC01000015
27.9 KB
53 CDS

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whole genome shotgun sequence
NZ_ABAC01000016
24.7 KB
30 CDS

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whole genome shotgun sequence
NZ_ABAC01000017
19.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAC01000018
7.8 KB
8 CDS

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whole genome shotgun sequence
NZ_ABAC01000019
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAC01000020
805 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAC01000021
632 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAC01000022
608 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAC01000023
591 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAC01000024
577 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAC01000025
512 bytes
0 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP11-BS70

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP11-BS70

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