Streptococcus pneumoniae SP14-BS69

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.6%, Released Date: May 18, 2007 #18449

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAD01000001
262.4 KB
354 CDS

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whole genome shotgun sequence
NZ_ABAD01000002
206.3 KB
275 CDS

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whole genome shotgun sequence
NZ_ABAD01000003
164.4 KB
206 CDS

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whole genome shotgun sequence
NZ_ABAD01000004
129.9 KB
163 CDS

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whole genome shotgun sequence
NZ_ABAD01000005
122.1 KB
160 CDS

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whole genome shotgun sequence
NZ_ABAD01000006
111.7 KB
150 CDS

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whole genome shotgun sequence
NZ_ABAD01000007
106.7 KB
125 CDS

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whole genome shotgun sequence
NZ_ABAD01000008
101.8 KB
134 CDS

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whole genome shotgun sequence
NZ_ABAD01000009
100.8 KB
133 CDS

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whole genome shotgun sequence
NZ_ABAD01000010
96.3 KB
136 CDS

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whole genome shotgun sequence
NZ_ABAD01000011
78.6 KB
95 CDS

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whole genome shotgun sequence
NZ_ABAD01000012
73.5 KB
99 CDS

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whole genome shotgun sequence
NZ_ABAD01000013
42.1 KB
50 CDS

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whole genome shotgun sequence
NZ_ABAD01000014
39.0 KB
52 CDS

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whole genome shotgun sequence
NZ_ABAD01000015
37.5 KB
55 CDS

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whole genome shotgun sequence
NZ_ABAD01000016
32.6 KB
43 CDS

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whole genome shotgun sequence
NZ_ABAD01000017
32.2 KB
37 CDS

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whole genome shotgun sequence
NZ_ABAD01000018
28.7 KB
37 CDS

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whole genome shotgun sequence
NZ_ABAD01000019
28.3 KB
38 CDS

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whole genome shotgun sequence
NZ_ABAD01000020
26.8 KB
41 CDS

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whole genome shotgun sequence
NZ_ABAD01000021
26.7 KB
46 CDS

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whole genome shotgun sequence
NZ_ABAD01000022
25.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ABAD01000023
21.7 KB
34 CDS

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whole genome shotgun sequence
NZ_ABAD01000024
20.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABAD01000025
20.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ABAD01000026
19.6 KB
33 CDS

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whole genome shotgun sequence
NZ_ABAD01000027
17.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAD01000028
14.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ABAD01000029
14.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ABAD01000030
14.0 KB
39 CDS

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whole genome shotgun sequence
NZ_ABAD01000031
13.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAD01000032
12.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ABAD01000033
9.2 KB
26 CDS

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whole genome shotgun sequence
NZ_ABAD01000034
7.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABAD01000035
5.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAD01000036
5.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAD01000037
4.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ABAD01000038
4.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAD01000039
3.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAD01000040
2.8 KB
8 CDS

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whole genome shotgun sequence
NZ_ABAD01000041
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAD01000042
1.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAD01000043
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAD01000044
1.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAD01000045
888 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABAD01000046
865 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAD01000047
651 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABAD01000048
633 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABAD01000049
566 bytes
0 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP14-BS69

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP14-BS69

Related Genomes