Streptococcus pneumoniae SP19-BS75

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.6%, Released Date: May 18, 2007 #18451

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAF01000001
389.2 KB
462 CDS

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whole genome shotgun sequence
NZ_ABAF01000002
258.9 KB
316 CDS

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whole genome shotgun sequence
NZ_ABAF01000003
218.4 KB
271 CDS

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whole genome shotgun sequence
NZ_ABAF01000004
193.0 KB
236 CDS

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whole genome shotgun sequence
NZ_ABAF01000005
179.3 KB
191 CDS

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whole genome shotgun sequence
NZ_ABAF01000006
107.4 KB
122 CDS

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whole genome shotgun sequence
NZ_ABAF01000007
97.7 KB
113 CDS

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whole genome shotgun sequence
NZ_ABAF01000008
92.4 KB
118 CDS

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whole genome shotgun sequence
NZ_ABAF01000009
76.9 KB
98 CDS

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whole genome shotgun sequence
NZ_ABAF01000010
56.9 KB
85 CDS

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whole genome shotgun sequence
NZ_ABAF01000011
46.7 KB
52 CDS

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whole genome shotgun sequence
NZ_ABAF01000012
45.9 KB
57 CDS

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whole genome shotgun sequence
NZ_ABAF01000013
42.1 KB
54 CDS

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whole genome shotgun sequence
NZ_ABAF01000014
39.6 KB
40 CDS

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whole genome shotgun sequence
NZ_ABAF01000015
34.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ABAF01000016
29.5 KB
35 CDS

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whole genome shotgun sequence
NZ_ABAF01000017
24.8 KB
33 CDS

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whole genome shotgun sequence
NZ_ABAF01000018
23.4 KB
24 CDS

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whole genome shotgun sequence
NZ_ABAF01000019
21.1 KB
23 CDS

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whole genome shotgun sequence
NZ_ABAF01000020
19.7 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAF01000021
13.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ABAF01000022
12.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAF01000023
12.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ABAF01000024
11.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAF01000025
10.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAF01000026
9.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAF01000027
6.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ABAF01000028
5.5 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAF01000029
2.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAF01000030
1004 bytes
1 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP19-BS75

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP19-BS75

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