Streptococcus pneumoniae SP23-BS72

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.7%, Released Date: May 22, 2007 #18453

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAG01000001
285.9 KB
352 CDS

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whole genome shotgun sequence
NZ_ABAG01000002
213.2 KB
244 CDS

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whole genome shotgun sequence
NZ_ABAG01000003
170.5 KB
207 CDS

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whole genome shotgun sequence
NZ_ABAG01000004
139.3 KB
144 CDS

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whole genome shotgun sequence
NZ_ABAG01000005
124.4 KB
149 CDS

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whole genome shotgun sequence
NZ_ABAG01000006
116.3 KB
148 CDS

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whole genome shotgun sequence
NZ_ABAG01000007
95.3 KB
108 CDS

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whole genome shotgun sequence
NZ_ABAG01000008
84.2 KB
105 CDS

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whole genome shotgun sequence
NZ_ABAG01000009
82.6 KB
105 CDS

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whole genome shotgun sequence
NZ_ABAG01000010
82.4 KB
95 CDS

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whole genome shotgun sequence
NZ_ABAG01000011
68.5 KB
82 CDS

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whole genome shotgun sequence
NZ_ABAG01000012
57.9 KB
86 CDS

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whole genome shotgun sequence
NZ_ABAG01000013
57.8 KB
61 CDS

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whole genome shotgun sequence
NZ_ABAG01000014
56.3 KB
76 CDS

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whole genome shotgun sequence
NZ_ABAG01000015
55.2 KB
62 CDS

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whole genome shotgun sequence
NZ_ABAG01000016
54.7 KB
59 CDS

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whole genome shotgun sequence
NZ_ABAG01000017
46.2 KB
53 CDS

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whole genome shotgun sequence
NZ_ABAG01000018
42.8 KB
55 CDS

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whole genome shotgun sequence
NZ_ABAG01000019
42.3 KB
43 CDS

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whole genome shotgun sequence
NZ_ABAG01000020
36.0 KB
31 CDS

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whole genome shotgun sequence
NZ_ABAG01000021
33.6 KB
34 CDS

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whole genome shotgun sequence
NZ_ABAG01000022
30.5 KB
31 CDS

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whole genome shotgun sequence
NZ_ABAG01000023
25.2 KB
30 CDS

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whole genome shotgun sequence
NZ_ABAG01000024
19.0 KB
20 CDS

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whole genome shotgun sequence
NZ_ABAG01000025
18.3 KB
18 CDS

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whole genome shotgun sequence
NZ_ABAG01000026
5.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAG01000027
4.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAG01000028
1.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAG01000029
814 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAG01000030
790 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAG01000031
735 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABAG01000032
713 bytes
0 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP23-BS72

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP23-BS72

Related Genomes