Streptococcus pneumoniae SP3-BS71

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.8%, Released Date: May 22, 2007 #18454

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAZZ01000001
433.4 KB
524 CDS

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whole genome shotgun sequence
NZ_AAZZ01000002
256.6 KB
309 CDS

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whole genome shotgun sequence
NZ_AAZZ01000003
195.0 KB
195 CDS

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whole genome shotgun sequence
NZ_AAZZ01000004
143.0 KB
170 CDS

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whole genome shotgun sequence
NZ_AAZZ01000005
141.6 KB
183 CDS

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whole genome shotgun sequence
NZ_AAZZ01000006
110.0 KB
130 CDS

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whole genome shotgun sequence
NZ_AAZZ01000007
95.0 KB
118 CDS

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whole genome shotgun sequence
NZ_AAZZ01000008
94.2 KB
112 CDS

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whole genome shotgun sequence
NZ_AAZZ01000009
87.5 KB
109 CDS

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whole genome shotgun sequence
NZ_AAZZ01000010
84.0 KB
112 CDS

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whole genome shotgun sequence
NZ_AAZZ01000011
70.4 KB
91 CDS

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whole genome shotgun sequence
NZ_AAZZ01000012
62.1 KB
59 CDS

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whole genome shotgun sequence
NZ_AAZZ01000013
56.7 KB
64 CDS

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whole genome shotgun sequence
NZ_AAZZ01000014
54.7 KB
67 CDS

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whole genome shotgun sequence
NZ_AAZZ01000015
35.6 KB
39 CDS

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whole genome shotgun sequence
NZ_AAZZ01000016
26.4 KB
45 CDS

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whole genome shotgun sequence
NZ_AAZZ01000017
12.4 KB
20 CDS

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whole genome shotgun sequence
NZ_AAZZ01000018
11.8 KB
17 CDS

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whole genome shotgun sequence
NZ_AAZZ01000019
4.8 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZZ01000020
4.0 KB
5 CDS

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whole genome shotgun sequence
NZ_AAZZ01000021
3.9 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZZ01000022
745 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAZZ01000023
578 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAZZ01000024
542 bytes
2 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP3-BS71

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP3-BS71

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