Streptococcus pneumoniae SP6-BS73

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.6%, Released Date: May 22, 2007 #18455

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAA01000001
431.4 KB
519 CDS

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whole genome shotgun sequence
NZ_ABAA01000002
202.1 KB
247 CDS

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whole genome shotgun sequence
NZ_ABAA01000003
187.7 KB
218 CDS

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whole genome shotgun sequence
NZ_ABAA01000004
145.8 KB
153 CDS

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whole genome shotgun sequence
NZ_ABAA01000005
135.0 KB
145 CDS

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whole genome shotgun sequence
NZ_ABAA01000006
110.5 KB
118 CDS

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whole genome shotgun sequence
NZ_ABAA01000007
100.5 KB
116 CDS

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whole genome shotgun sequence
NZ_ABAA01000008
82.7 KB
99 CDS

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whole genome shotgun sequence
NZ_ABAA01000009
80.0 KB
98 CDS

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whole genome shotgun sequence
NZ_ABAA01000010
75.4 KB
100 CDS

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whole genome shotgun sequence
NZ_ABAA01000011
64.7 KB
77 CDS

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whole genome shotgun sequence
NZ_ABAA01000012
60.9 KB
81 CDS

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whole genome shotgun sequence
NZ_ABAA01000013
53.4 KB
64 CDS

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whole genome shotgun sequence
NZ_ABAA01000014
46.3 KB
52 CDS

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whole genome shotgun sequence
NZ_ABAA01000015
45.1 KB
60 CDS

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whole genome shotgun sequence
NZ_ABAA01000016
39.8 KB
57 CDS

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whole genome shotgun sequence
NZ_ABAA01000017
38.4 KB
60 CDS

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whole genome shotgun sequence
NZ_ABAA01000018
33.0 KB
47 CDS

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whole genome shotgun sequence
NZ_ABAA01000019
26.0 KB
37 CDS

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whole genome shotgun sequence
NZ_ABAA01000020
22.2 KB
22 CDS

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whole genome shotgun sequence
NZ_ABAA01000021
20.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAA01000022
19.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ABAA01000023
17.4 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAA01000024
17.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABAA01000025
12.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAA01000026
11.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAA01000027
9.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ABAA01000028
6.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ABAA01000029
5.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ABAA01000030
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAA01000031
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAA01000032
949 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABAA01000033
855 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAA01000034
799 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAA01000035
767 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAA01000036
751 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAA01000037
741 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAA01000038
687 bytes
0 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP6-BS73

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP6-BS73

Related Genomes