Streptococcus pneumoniae SP9-BS68

Allegheny-Singer Research Institute (ASRI)

GC Content: 39.6%, Released Date: May 22, 2007 #18456

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAB01000001
209.2 KB
229 CDS

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whole genome shotgun sequence
NZ_ABAB01000002
129.2 KB
142 CDS

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whole genome shotgun sequence
NZ_ABAB01000003
105.1 KB
138 CDS

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whole genome shotgun sequence
NZ_ABAB01000004
104.4 KB
134 CDS

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whole genome shotgun sequence
NZ_ABAB01000005
98.2 KB
131 CDS

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whole genome shotgun sequence
NZ_ABAB01000006
94.6 KB
118 CDS

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whole genome shotgun sequence
NZ_ABAB01000007
92.9 KB
107 CDS

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whole genome shotgun sequence
NZ_ABAB01000008
73.4 KB
91 CDS

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whole genome shotgun sequence
NZ_ABAB01000009
72.3 KB
89 CDS

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whole genome shotgun sequence
NZ_ABAB01000010
66.0 KB
99 CDS

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whole genome shotgun sequence
NZ_ABAB01000011
61.6 KB
60 CDS

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whole genome shotgun sequence
NZ_ABAB01000012
56.6 KB
67 CDS

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whole genome shotgun sequence
NZ_ABAB01000013
51.8 KB
49 CDS

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whole genome shotgun sequence
NZ_ABAB01000014
51.6 KB
54 CDS

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whole genome shotgun sequence
NZ_ABAB01000015
51.2 KB
51 CDS

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whole genome shotgun sequence
NZ_ABAB01000016
49.7 KB
47 CDS

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whole genome shotgun sequence
NZ_ABAB01000017
48.5 KB
57 CDS

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whole genome shotgun sequence
NZ_ABAB01000018
45.0 KB
50 CDS

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whole genome shotgun sequence
NZ_ABAB01000019
35.9 KB
47 CDS

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whole genome shotgun sequence
NZ_ABAB01000020
33.2 KB
37 CDS

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whole genome shotgun sequence
NZ_ABAB01000021
32.2 KB
42 CDS

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whole genome shotgun sequence
NZ_ABAB01000022
31.6 KB
39 CDS

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whole genome shotgun sequence
NZ_ABAB01000023
30.6 KB
38 CDS

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whole genome shotgun sequence
NZ_ABAB01000024
29.2 KB
36 CDS

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whole genome shotgun sequence
NZ_ABAB01000025
28.0 KB
28 CDS

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whole genome shotgun sequence
NZ_ABAB01000026
26.3 KB
29 CDS

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whole genome shotgun sequence
NZ_ABAB01000027
25.4 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAB01000028
25.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAB01000029
24.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ABAB01000030
23.2 KB
23 CDS

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whole genome shotgun sequence
NZ_ABAB01000031
22.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAB01000032
22.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ABAB01000033
18.6 KB
28 CDS

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whole genome shotgun sequence
NZ_ABAB01000034
17.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ABAB01000035
15.1 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAB01000036
13.4 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAB01000037
12.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ABAB01000038
11.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ABAB01000039
10.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAB01000040
9.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ABAB01000041
9.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ABAB01000042
9.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABAB01000043
8.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAB01000044
8.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAB01000045
8.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ABAB01000046
6.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAB01000047
6.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ABAB01000048
6.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAB01000049
6.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ABAB01000050
5.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ABAB01000051
5.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ABAB01000052
4.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAB01000053
4.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAB01000054
3.8 KB
8 CDS

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whole genome shotgun sequence
NZ_ABAB01000055
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAB01000056
2.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAB01000057
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAB01000058
1.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAB01000059
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAB01000060
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAB01000061
563 bytes
0 CDS

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Taxonomy

External Links

Streptococcus pneumoniae SP9-BS68

Search Genome

Sequences

PubMed Search for Streptococcus pneumoniae SP9-BS68

Related Genomes