Streptococcus salivarius SK126

J. Craig Venter Institute

GC Content: 40.1%, Released Date: April 29, 2009 #18460

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACLO01000001
565 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000002
525 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000003
511 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000004
617 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000005
8.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000006
35.8 KB
36 CDS

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whole genome shotgun sequence
NZ_ACLO01000007
30.6 KB
16 CDS

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whole genome shotgun sequence
NZ_ACLO01000008
16.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACLO01000009
515 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000010
102.3 KB
97 CDS

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whole genome shotgun sequence
NZ_ACLO01000011
945 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000012
503 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000013
5.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ACLO01000014
626 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000015
541 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000016
502 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000017
502 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000018
86.9 KB
82 CDS

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whole genome shotgun sequence
NZ_ACLO01000019
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000020
507 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000021
4.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000022
733 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000023
817 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000024
46.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ACLO01000025
11.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACLO01000026
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACLO01000027
513 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000028
503 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000029
520 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000030
4.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACLO01000031
39.3 KB
39 CDS

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whole genome shotgun sequence
NZ_ACLO01000032
516 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000033
977 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000034
27.2 KB
28 CDS

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whole genome shotgun sequence
NZ_ACLO01000035
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000036
514 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000037
512 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000038
514 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000039
543 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000040
519 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000041
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000042
502 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000043
544 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000044
507 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000045
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000046
506 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000047
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000048
515 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000049
526 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000050
500 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000051
541 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000052
26.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ACLO01000053
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000054
527 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000055
137.6 KB
126 CDS

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whole genome shotgun sequence
NZ_ACLO01000056
736 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000057
504 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000058
505 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000059
512 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000060
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000061
729 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000062
386.0 KB
384 CDS

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whole genome shotgun sequence
NZ_ACLO01000063
512 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000064
188.8 KB
179 CDS

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whole genome shotgun sequence
NZ_ACLO01000065
768 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000066
907 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000067
96.5 KB
95 CDS

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whole genome shotgun sequence
NZ_ACLO01000068
849 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000069
577 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000070
543 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000071
157.0 KB
139 CDS

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whole genome shotgun sequence
NZ_ACLO01000072
53.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ACLO01000073
540 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000074
507 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000075
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000076
629 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000077
546 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000078
552 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000079
4.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACLO01000080
565 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000081
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000082
789 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACLO01000083
509 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000084
500 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000085
926 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000086
84.5 KB
80 CDS

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whole genome shotgun sequence
NZ_ACLO01000087
10.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ACLO01000088
511 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000089
169.5 KB
190 CDS

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whole genome shotgun sequence
NZ_ACLO01000090
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000091
532 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000092
279.1 KB
289 CDS

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whole genome shotgun sequence
NZ_ACLO01000093
712 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000094
514 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000095
6.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACLO01000096
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACLO01000097
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000098
619 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000099
581 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACLO01000100
526 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACLO01000101
599 bytes
1 CDS

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Taxonomy

External Links

Streptococcus salivarius SK126

Search Genome

Sequences

PubMed Search for Streptococcus salivarius SK126

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