Streptomyces sp. AA4

Broad Institute

GC Content: 69.8%, Released Date: Feb. 26, 2009 #18469

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACEV01000001
173.5 KB
162 CDS

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whole genome shotgun sequence
NZ_ACEV01000002
4.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEV01000003
99.7 KB
110 CDS

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whole genome shotgun sequence
NZ_ACEV01000004
37.5 KB
38 CDS

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whole genome shotgun sequence
NZ_ACEV01000005
394.2 KB
402 CDS

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whole genome shotgun sequence
NZ_ACEV01000006
65.3 KB
71 CDS

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whole genome shotgun sequence
NZ_ACEV01000007
68.5 KB
61 CDS

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whole genome shotgun sequence
NZ_ACEV01000008
44.2 KB
36 CDS

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whole genome shotgun sequence
NZ_ACEV01000009
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACEV01000010
112.3 KB
107 CDS

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whole genome shotgun sequence
NZ_ACEV01000011
30.6 KB
30 CDS

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whole genome shotgun sequence
NZ_ACEV01000012
53.0 KB
49 CDS

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whole genome shotgun sequence
NZ_ACEV01000013
343.4 KB
316 CDS

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whole genome shotgun sequence
NZ_ACEV01000014
189.8 KB
177 CDS

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whole genome shotgun sequence
NZ_ACEV01000015
90.9 KB
97 CDS

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whole genome shotgun sequence
NZ_ACEV01000016
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACEV01000017
53.8 KB
49 CDS

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whole genome shotgun sequence
NZ_ACEV01000018
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACEV01000019
17.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEV01000020
18.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ACEV01000021
127.6 KB
133 CDS

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whole genome shotgun sequence
NZ_ACEV01000022
226.4 KB
213 CDS

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whole genome shotgun sequence
NZ_ACEV01000023
15.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEV01000024
20.4 KB
18 CDS

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whole genome shotgun sequence
NZ_ACEV01000025
22.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ACEV01000026
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEV01000027
54.3 KB
48 CDS

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whole genome shotgun sequence
NZ_ACEV01000028
22.2 KB
23 CDS

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whole genome shotgun sequence
NZ_ACEV01000029
34.1 KB
35 CDS

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whole genome shotgun sequence
NZ_ACEV01000030
20.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ACEV01000031
7.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ACEV01000032
54.9 KB
47 CDS

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whole genome shotgun sequence
NZ_ACEV01000033
10.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ACEV01000034
32.0 KB
29 CDS

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whole genome shotgun sequence
NZ_ACEV01000035
4.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEV01000036
70.2 KB
69 CDS

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whole genome shotgun sequence
NZ_ACEV01000037
265.9 KB
231 CDS

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whole genome shotgun sequence
NZ_ACEV01000038
64.8 KB
72 CDS

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whole genome shotgun sequence
NZ_ACEV01000039
322.4 KB
333 CDS

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whole genome shotgun sequence
NZ_ACEV01000040
61.3 KB
70 CDS

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whole genome shotgun sequence
NZ_ACEV01000041
73.6 KB
43 CDS

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whole genome shotgun sequence
NZ_ACEV01000042
47.0 KB
36 CDS

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whole genome shotgun sequence
NZ_ACEV01000043
237.3 KB
227 CDS

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whole genome shotgun sequence
NZ_ACEV01000044
130.6 KB
119 CDS

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whole genome shotgun sequence
NZ_ACEV01000045
63.3 KB
62 CDS

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whole genome shotgun sequence
NZ_ACEV01000046
19.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ACEV01000047
15.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEV01000048
283.8 KB
248 CDS

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whole genome shotgun sequence
NZ_ACEV01000049
124.9 KB
127 CDS

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whole genome shotgun sequence
NZ_ACEV01000050
213.4 KB
205 CDS

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whole genome shotgun sequence
NZ_ACEV01000051
42.1 KB
39 CDS

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whole genome shotgun sequence
NZ_ACEV01000052
212.3 KB
188 CDS

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whole genome shotgun sequence
NZ_ACEV01000053
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACEV01000054
62.0 KB
57 CDS

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whole genome shotgun sequence
NZ_ACEV01000055
6.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACEV01000056
32.3 KB
30 CDS

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whole genome shotgun sequence
NZ_ACEV01000057
4.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ACEV01000058
93.6 KB
90 CDS

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whole genome shotgun sequence
NZ_ACEV01000059
66.7 KB
62 CDS

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whole genome shotgun sequence
NZ_ACEV01000060
56.0 KB
60 CDS

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whole genome shotgun sequence
NZ_ACEV01000061
95.0 KB
95 CDS

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whole genome shotgun sequence
NZ_ACEV01000062
292 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACEV01000063
46.0 KB
39 CDS

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whole genome shotgun sequence
NZ_ACEV01000064
10.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ACEV01000065
105.1 KB
105 CDS

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whole genome shotgun sequence
NZ_ACEV01000066
7.2 KB
9 CDS

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whole genome shotgun sequence
NZ_ACEV01000067
374.7 KB
357 CDS

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whole genome shotgun sequence
NZ_ACEV01000068
7.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ACEV01000069
14.3 KB
18 CDS

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whole genome shotgun sequence
NZ_ACEV01000070
31.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ACEV01000071
65.7 KB
63 CDS

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whole genome shotgun sequence
NZ_ACEV01000072
84.3 KB
73 CDS

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whole genome shotgun sequence
NZ_ACEV01000073
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACEV01000074
23.1 KB
21 CDS

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whole genome shotgun sequence
NZ_ACEV01000075
372.1 KB
340 CDS

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whole genome shotgun sequence
NZ_ACEV01000076
68.3 KB
66 CDS

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whole genome shotgun sequence
NZ_ACEV01000077
28.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ACEV01000078
126.1 KB
96 CDS

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whole genome shotgun sequence
NZ_ACEV01000079
30.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ACEV01000080
15.9 KB
13 CDS

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whole genome shotgun sequence
NZ_ACEV01000081
64.3 KB
75 CDS

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whole genome shotgun sequence
NZ_ACEV01000082
34.5 KB
38 CDS

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whole genome shotgun sequence
NZ_ACEV01000083
69.2 KB
71 CDS

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whole genome shotgun sequence
NZ_ACEV01000084
168.8 KB
160 CDS

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whole genome shotgun sequence
NZ_ACEV01000085
28.1 KB
24 CDS

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whole genome shotgun sequence
NZ_ACEV01000086
39.1 KB
38 CDS

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whole genome shotgun sequence
NZ_ACEV01000087
554.2 KB
530 CDS

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whole genome shotgun sequence
NZ_ACEV01000088
595.8 KB
600 CDS

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whole genome shotgun sequence
NZ_ACEV01000089
140.4 KB
134 CDS

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whole genome shotgun sequence
NZ_ACEV01000090
20.1 KB
19 CDS

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whole genome shotgun sequence
NZ_ACEV01000091
319.4 KB
323 CDS

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whole genome shotgun sequence
NZ_ACEV01000092
11.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACEV01000093
30.2 KB
27 CDS

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whole genome shotgun sequence
NZ_ACEV01000094
88.8 KB
88 CDS

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whole genome shotgun sequence
NZ_ACEV01000095
46.5 KB
49 CDS

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whole genome shotgun sequence
NZ_ACEV01000096
95.8 KB
100 CDS

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whole genome shotgun sequence
NZ_ACEV01000097
26.1 KB
27 CDS

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whole genome shotgun sequence
NZ_ACEV01000098
64.8 KB
86 CDS

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Taxonomy

External Links

Streptomyces sp. AA4

Search Genome

Sequences

PubMed Search for Streptomyces sp. AA4

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