Streptomyces sp. ACT-1

DOE Joint Genome Institute

Genome Size: 8.6 megabases, GC Content: 72.2%, Released Date: Dec. 30, 2009 #20737

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ADFC01000001
524.8 KB
436 CDS

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whole genome shotgun sequence
NZ_ADFC01000002
363.2 KB
289 CDS

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whole genome shotgun sequence
NZ_ADFC01000003
326.5 KB
243 CDS

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whole genome shotgun sequence
NZ_ADFC01000004
309.1 KB
299 CDS

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whole genome shotgun sequence
NZ_ADFC01000005
301.8 KB
306 CDS

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whole genome shotgun sequence
NZ_ADFC01000006
280.1 KB
237 CDS

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whole genome shotgun sequence
NZ_ADFC01000007
277.0 KB
240 CDS

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whole genome shotgun sequence
NZ_ADFC01000008
260.2 KB
286 CDS

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whole genome shotgun sequence
NZ_ADFC01000009
251.0 KB
235 CDS

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whole genome shotgun sequence
NZ_ADFC01000010
241.3 KB
235 CDS

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whole genome shotgun sequence
NZ_ADFC01000011
220.6 KB
197 CDS

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whole genome shotgun sequence
NZ_ADFC01000012
204.7 KB
175 CDS

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whole genome shotgun sequence
NZ_ADFC01000013
204.3 KB
188 CDS

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whole genome shotgun sequence
NZ_ADFC01000014
197.9 KB
180 CDS

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whole genome shotgun sequence
NZ_ADFC01000015
181.6 KB
158 CDS

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whole genome shotgun sequence
NZ_ADFC01000016
171.1 KB
151 CDS

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whole genome shotgun sequence
NZ_ADFC01000017
170.1 KB
160 CDS

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whole genome shotgun sequence
NZ_ADFC01000018
143.6 KB
148 CDS

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whole genome shotgun sequence
NZ_ADFC01000019
141.6 KB
115 CDS

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whole genome shotgun sequence
NZ_ADFC01000020
140.8 KB
131 CDS

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whole genome shotgun sequence
NZ_ADFC01000021
139.2 KB
132 CDS

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whole genome shotgun sequence
NZ_ADFC01000022
137.4 KB
124 CDS

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whole genome shotgun sequence
NZ_ADFC01000023
131.7 KB
111 CDS

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whole genome shotgun sequence
NZ_ADFC01000024
126.7 KB
111 CDS

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whole genome shotgun sequence
NZ_ADFC01000025
124.4 KB
120 CDS

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whole genome shotgun sequence
NZ_ADFC01000026
121.0 KB
108 CDS

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whole genome shotgun sequence
NZ_ADFC01000027
113.3 KB
94 CDS

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whole genome shotgun sequence
NZ_ADFC01000028
110.8 KB
115 CDS

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whole genome shotgun sequence
NZ_ADFC01000029
105.9 KB
97 CDS

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whole genome shotgun sequence
NZ_ADFC01000030
105.8 KB
100 CDS

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whole genome shotgun sequence
NZ_ADFC01000031
97.2 KB
75 CDS

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whole genome shotgun sequence
NZ_ADFC01000032
92.0 KB
66 CDS

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whole genome shotgun sequence
NZ_ADFC01000033
92.0 KB
86 CDS

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whole genome shotgun sequence
NZ_ADFC01000034
80.8 KB
54 CDS

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whole genome shotgun sequence
NZ_ADFC01000035
80.7 KB
73 CDS

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whole genome shotgun sequence
NZ_ADFC01000036
80.3 KB
75 CDS

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whole genome shotgun sequence
NZ_ADFC01000037
79.2 KB
59 CDS

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whole genome shotgun sequence
NZ_ADFC01000038
73.9 KB
71 CDS

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whole genome shotgun sequence
NZ_ADFC01000039
73.8 KB
61 CDS

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whole genome shotgun sequence
NZ_ADFC01000040
63.4 KB
58 CDS

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whole genome shotgun sequence
NZ_ADFC01000041
62.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ADFC01000042
60.5 KB
53 CDS

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whole genome shotgun sequence
NZ_ADFC01000043
55.2 KB
53 CDS

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whole genome shotgun sequence
NZ_ADFC01000044
53.0 KB
23 CDS

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whole genome shotgun sequence
NZ_ADFC01000045
53.0 KB
41 CDS

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whole genome shotgun sequence
NZ_ADFC01000046
51.8 KB
50 CDS

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whole genome shotgun sequence
NZ_ADFC01000047
48.4 KB
46 CDS

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whole genome shotgun sequence
NZ_ADFC01000048
47.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ADFC01000049
44.0 KB
42 CDS

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whole genome shotgun sequence
NZ_ADFC01000050
41.5 KB
36 CDS

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whole genome shotgun sequence
NZ_ADFC01000051
38.6 KB
34 CDS

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whole genome shotgun sequence
NZ_ADFC01000052
37.9 KB
37 CDS

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whole genome shotgun sequence
NZ_ADFC01000053
35.6 KB
36 CDS

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whole genome shotgun sequence
NZ_ADFC01000054
34.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ADFC01000055
34.1 KB
35 CDS

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whole genome shotgun sequence
NZ_ADFC01000056
33.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ADFC01000057
32.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ADFC01000058
29.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ADFC01000059
27.9 KB
23 CDS

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whole genome shotgun sequence
NZ_ADFC01000060
27.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ADFC01000061
25.9 KB
15 CDS

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whole genome shotgun sequence
NZ_ADFC01000062
25.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ADFC01000063
25.4 KB
22 CDS

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whole genome shotgun sequence
NZ_ADFC01000064
24.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ADFC01000065
23.9 KB
24 CDS

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whole genome shotgun sequence
NZ_ADFC01000066
23.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ADFC01000067
22.9 KB
26 CDS

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whole genome shotgun sequence
NZ_ADFC01000068
22.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ADFC01000069
22.1 KB
24 CDS

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whole genome shotgun sequence
NZ_ADFC01000070
21.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ADFC01000071
21.6 KB
22 CDS

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whole genome shotgun sequence
NZ_ADFC01000072
21.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ADFC01000073
21.1 KB
24 CDS

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whole genome shotgun sequence
NZ_ADFC01000074
20.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ADFC01000075
19.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ADFC01000076
19.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ADFC01000077
18.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ADFC01000078
15.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ADFC01000079
14.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ADFC01000080
11.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ADFC01000081
10.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ADFC01000082
10.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ADFC01000083
9.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000084
9.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ADFC01000085
8.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000086
8.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ADFC01000087
7.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ADFC01000088
7.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000089
6.7 KB
9 CDS

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whole genome shotgun sequence
NZ_ADFC01000090
6.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ADFC01000091
6.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ADFC01000092
5.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ADFC01000093
4.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000094
4.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ADFC01000095
3.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000096
3.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000097
3.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000098
3.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ADFC01000099
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000100
2.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000101
2.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000102
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000103
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000104
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000105
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFC01000106
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000107
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000108
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000109
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000110
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000111
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000112
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000113
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000114
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000115
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000116
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFC01000117
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000118
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000119
996 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000120
906 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000121
871 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000122
751 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000123
724 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000124
642 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADFC01000125
565 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADFC01000126
560 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFC01000127
522 bytes
1 CDS

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Taxonomy

External Links

Streptomyces sp. ACT-1

Search Genome

Sequences

PubMed Search for Streptomyces sp. ACT-1

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