Streptomyces sp. ACTE

DOE Joint Genome Institute

Genome Size: 7.4 megabases, GC Content: 71.8%, Released Date: Dec. 30, 2009 #20738

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ADFD01000001
635.8 KB
633 CDS

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whole genome shotgun sequence
NZ_ADFD01000002
496.8 KB
443 CDS

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whole genome shotgun sequence
NZ_ADFD01000003
425.9 KB
397 CDS

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whole genome shotgun sequence
NZ_ADFD01000004
413.7 KB
392 CDS

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whole genome shotgun sequence
NZ_ADFD01000005
404.3 KB
292 CDS

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whole genome shotgun sequence
NZ_ADFD01000006
401.3 KB
359 CDS

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whole genome shotgun sequence
NZ_ADFD01000007
373.7 KB
343 CDS

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whole genome shotgun sequence
NZ_ADFD01000008
344.9 KB
302 CDS

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whole genome shotgun sequence
NZ_ADFD01000009
338.0 KB
330 CDS

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whole genome shotgun sequence
NZ_ADFD01000010
322.8 KB
291 CDS

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whole genome shotgun sequence
NZ_ADFD01000011
315.3 KB
298 CDS

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whole genome shotgun sequence
NZ_ADFD01000012
301.5 KB
248 CDS

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whole genome shotgun sequence
NZ_ADFD01000013
282.9 KB
264 CDS

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whole genome shotgun sequence
NZ_ADFD01000014
264.5 KB
236 CDS

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whole genome shotgun sequence
NZ_ADFD01000015
219.3 KB
212 CDS

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whole genome shotgun sequence
NZ_ADFD01000016
219.1 KB
215 CDS

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whole genome shotgun sequence
NZ_ADFD01000017
171.1 KB
183 CDS

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whole genome shotgun sequence
NZ_ADFD01000018
153.7 KB
135 CDS

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whole genome shotgun sequence
NZ_ADFD01000019
147.0 KB
148 CDS

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whole genome shotgun sequence
NZ_ADFD01000020
124.4 KB
105 CDS

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whole genome shotgun sequence
NZ_ADFD01000021
109.2 KB
91 CDS

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whole genome shotgun sequence
NZ_ADFD01000022
102.6 KB
97 CDS

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whole genome shotgun sequence
NZ_ADFD01000023
102.4 KB
85 CDS

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whole genome shotgun sequence
NZ_ADFD01000024
96.8 KB
78 CDS

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whole genome shotgun sequence
NZ_ADFD01000025
77.4 KB
65 CDS

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whole genome shotgun sequence
NZ_ADFD01000026
65.7 KB
49 CDS

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whole genome shotgun sequence
NZ_ADFD01000027
46.7 KB
36 CDS

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whole genome shotgun sequence
NZ_ADFD01000028
46.4 KB
33 CDS

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whole genome shotgun sequence
NZ_ADFD01000029
33.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ADFD01000030
31.3 KB
33 CDS

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whole genome shotgun sequence
NZ_ADFD01000031
26.1 KB
19 CDS

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whole genome shotgun sequence
NZ_ADFD01000032
25.2 KB
23 CDS

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whole genome shotgun sequence
NZ_ADFD01000033
23.0 KB
24 CDS

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whole genome shotgun sequence
NZ_ADFD01000034
20.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ADFD01000035
12.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ADFD01000036
4.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFD01000037
4.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ADFD01000038
2.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ADFD01000039
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFD01000040
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ADFD01000041
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFD01000042
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ADFD01000043
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFD01000044
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ADFD01000045
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFD01000046
941 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADFD01000047
858 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFD01000048
721 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADFD01000049
673 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFD01000050
593 bytes
1 CDS

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Taxonomy

External Links

Streptomyces sp. ACTE

Search Genome

Sequences

PubMed Search for Streptomyces sp. ACTE

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