Sulfitobacter sp. NAS-14.1

J. Craig Venter Institute

Genome Size: 5.0 megabases, GC Content: 60.0%, Released Date: Dec. 22, 2005 #18475

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AALZ01000001
736.4 KB
761 CDS

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whole genome shotgun sequence
NZ_AALZ01000002
544.7 KB
536 CDS

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whole genome shotgun sequence
NZ_AALZ01000003
485.1 KB
485 CDS

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whole genome shotgun sequence
NZ_AALZ01000004
403.8 KB
421 CDS

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whole genome shotgun sequence
NZ_AALZ01000005
333.7 KB
322 CDS

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whole genome shotgun sequence
NZ_AALZ01000006
202.3 KB
202 CDS

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whole genome shotgun sequence
NZ_AALZ01000007
175.8 KB
172 CDS

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whole genome shotgun sequence
NZ_AALZ01000008
168.5 KB
162 CDS

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whole genome shotgun sequence
NZ_AALZ01000009
159.5 KB
162 CDS

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whole genome shotgun sequence
NZ_AALZ01000010
139.5 KB
136 CDS

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whole genome shotgun sequence
NZ_AALZ01000011
96.0 KB
114 CDS

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whole genome shotgun sequence
NZ_AALZ01000012
92.3 KB
95 CDS

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whole genome shotgun sequence
NZ_AALZ01000013
82.3 KB
73 CDS

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whole genome shotgun sequence
NZ_AALZ01000014
76.3 KB
77 CDS

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whole genome shotgun sequence
NZ_AALZ01000015
72.3 KB
75 CDS

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whole genome shotgun sequence
NZ_AALZ01000016
23.7 KB
25 CDS

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whole genome shotgun sequence
NZ_AALZ01000017
23.2 KB
30 CDS

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whole genome shotgun sequence
NZ_AALZ01000018
16.5 KB
22 CDS

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whole genome shotgun sequence
NZ_AALZ01000019
15.3 KB
21 CDS

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whole genome shotgun sequence
NZ_AALZ01000020
12.4 KB
13 CDS

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whole genome shotgun sequence
NZ_AALZ01000021
11.6 KB
13 CDS

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whole genome shotgun sequence
NZ_AALZ01000022
10.1 KB
15 CDS

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whole genome shotgun sequence
NZ_AALZ01000023
8.3 KB
8 CDS

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whole genome shotgun sequence
NZ_AALZ01000024
8.0 KB
10 CDS

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whole genome shotgun sequence
NZ_AALZ01000025
4.2 KB
4 CDS

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whole genome shotgun sequence
NZ_AALZ01000026
4.1 KB
4 CDS

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whole genome shotgun sequence
NZ_AALZ01000027
2.4 KB
4 CDS

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Taxonomy

External Links

Sulfitobacter sp. NAS-14.1

Search Genome

Sequences

PubMed Search for Sulfitobacter sp. NAS-14.1

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