Thermoanaerobacter brockii subsp. finnii Ako-1

DOE Joint Genome Institute

GC Content: 32.0%, Released Date: June 23, 2009 #18484

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

sequence, whole genome shotgun sequence
NZ_ACQZ01000001
143.9 KB
146 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000002
115.2 KB
105 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000003
102.2 KB
101 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000004
101.2 KB
118 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000005
100.2 KB
112 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000006
79.8 KB
95 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000007
79.8 KB
92 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000008
78.0 KB
85 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000009
75.5 KB
71 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000010
67.9 KB
82 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000011
66.0 KB
60 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000012
64.5 KB
64 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000013
62.0 KB
60 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000014
53.1 KB
46 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000015
52.4 KB
52 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000016
51.9 KB
54 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000017
49.2 KB
54 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000018
48.0 KB
55 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000019
40.9 KB
42 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000020
38.3 KB
37 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000021
37.6 KB
41 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000022
36.4 KB
31 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000023
34.0 KB
40 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000024
31.2 KB
35 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000025
30.5 KB
30 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000026
28.8 KB
22 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000027
28.7 KB
17 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000028
26.7 KB
26 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000029
26.7 KB
31 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000030
24.3 KB
33 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000031
22.6 KB
25 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000032
21.1 KB
26 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000033
19.7 KB
38 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000034
15.7 KB
25 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000035
15.1 KB
9 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000036
14.8 KB
17 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000037
14.8 KB
14 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000038
14.1 KB
16 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000039
14.0 KB
14 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000040
13.6 KB
13 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000041
13.1 KB
15 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000042
12.5 KB
12 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000043
11.9 KB
10 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000044
11.6 KB
13 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000045
11.2 KB
9 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000046
11.1 KB
11 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000047
10.9 KB
14 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000048
10.7 KB
9 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000049
10.6 KB
14 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000050
10.1 KB
13 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000051
9.6 KB
10 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000052
9.0 KB
10 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000053
8.3 KB
6 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000054
7.6 KB
9 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000055
6.8 KB
7 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000056
6.3 KB
6 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000057
6.0 KB
6 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000058
5.7 KB
7 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000059
5.5 KB
2 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000060
4.9 KB
6 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000061
4.7 KB
6 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000062
4.4 KB
5 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000063
4.1 KB
4 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000064
4.1 KB
2 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000065
3.8 KB
3 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000066
3.2 KB
4 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000067
3.1 KB
4 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000068
2.3 KB
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000069
1.9 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000070
1.7 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000071
1.6 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000072
1.5 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000073
1.3 KB
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000074
1.3 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000075
1.2 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000076
1.2 KB
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000077
1.1 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000078
1.1 KB
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000079
1.0 KB
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000080
1017 bytes
2 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000081
996 bytes
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000082
950 bytes
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000083
914 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000084
890 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000085
873 bytes
0 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000086
844 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000087
789 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000088
786 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000089
765 bytes
2 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000090
695 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000091
667 bytes
2 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000092
650 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000093
601 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000094
576 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000095
559 bytes
1 CDS

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sequence, whole genome shotgun sequence
NZ_ACQZ01000096
507 bytes
1 CDS

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Taxonomy

External Links

Thermoanaerobacter brockii subsp. finnii Ako-1

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Sequences

PubMed Search for Thermoanaerobacter brockii subsp. finnii Ako-1

Related Genomes