Thermosinus carboxydivorans Nor1

DOE Joint Genome Institute

GC Content: 51.5%, Released Date: Jan. 5, 2007 #18491

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAWL01000001
341.5 KB
305 CDS

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whole genome shotgun sequence
NZ_AAWL01000002
261.9 KB
261 CDS

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whole genome shotgun sequence
NZ_AAWL01000003
231.4 KB
217 CDS

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whole genome shotgun sequence
NZ_AAWL01000004
185.8 KB
189 CDS

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whole genome shotgun sequence
NZ_AAWL01000005
163.8 KB
142 CDS

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whole genome shotgun sequence
NZ_AAWL01000006
124.6 KB
133 CDS

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whole genome shotgun sequence
NZ_AAWL01000007
105.7 KB
106 CDS

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whole genome shotgun sequence
NZ_AAWL01000008
103.0 KB
124 CDS

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whole genome shotgun sequence
NZ_AAWL01000009
100.6 KB
99 CDS

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whole genome shotgun sequence
NZ_AAWL01000010
97.6 KB
95 CDS

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whole genome shotgun sequence
NZ_AAWL01000011
90.3 KB
89 CDS

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whole genome shotgun sequence
NZ_AAWL01000012
76.0 KB
72 CDS

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whole genome shotgun sequence
NZ_AAWL01000013
63.5 KB
67 CDS

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whole genome shotgun sequence
NZ_AAWL01000014
54.4 KB
49 CDS

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whole genome shotgun sequence
NZ_AAWL01000015
54.0 KB
55 CDS

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whole genome shotgun sequence
NZ_AAWL01000016
52.9 KB
42 CDS

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whole genome shotgun sequence
NZ_AAWL01000017
48.1 KB
50 CDS

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whole genome shotgun sequence
NZ_AAWL01000018
47.6 KB
41 CDS

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whole genome shotgun sequence
NZ_AAWL01000019
46.0 KB
47 CDS

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whole genome shotgun sequence
NZ_AAWL01000020
42.4 KB
41 CDS

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whole genome shotgun sequence
NZ_AAWL01000021
42.3 KB
48 CDS

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whole genome shotgun sequence
NZ_AAWL01000022
38.9 KB
38 CDS

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whole genome shotgun sequence
NZ_AAWL01000023
34.1 KB
30 CDS

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whole genome shotgun sequence
NZ_AAWL01000024
33.7 KB
34 CDS

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whole genome shotgun sequence
NZ_AAWL01000025
33.0 KB
37 CDS

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whole genome shotgun sequence
NZ_AAWL01000026
32.1 KB
27 CDS

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whole genome shotgun sequence
NZ_AAWL01000027
30.6 KB
37 CDS

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whole genome shotgun sequence
NZ_AAWL01000028
30.2 KB
28 CDS

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whole genome shotgun sequence
NZ_AAWL01000029
29.0 KB
30 CDS

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whole genome shotgun sequence
NZ_AAWL01000030
27.2 KB
25 CDS

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whole genome shotgun sequence
NZ_AAWL01000031
25.4 KB
23 CDS

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whole genome shotgun sequence
NZ_AAWL01000032
22.2 KB
21 CDS

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whole genome shotgun sequence
NZ_AAWL01000033
21.8 KB
25 CDS

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whole genome shotgun sequence
NZ_AAWL01000034
19.3 KB
16 CDS

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whole genome shotgun sequence
NZ_AAWL01000035
15.2 KB
18 CDS

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whole genome shotgun sequence
NZ_AAWL01000036
13.5 KB
12 CDS

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whole genome shotgun sequence
NZ_AAWL01000037
11.3 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWL01000038
9.6 KB
9 CDS

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whole genome shotgun sequence
NZ_AAWL01000039
9.6 KB
14 CDS

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whole genome shotgun sequence
NZ_AAWL01000040
9.3 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWL01000041
7.5 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWL01000042
7.3 KB
7 CDS

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whole genome shotgun sequence
NZ_AAWL01000043
6.5 KB
6 CDS

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whole genome shotgun sequence
NZ_AAWL01000044
5.7 KB
4 CDS

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whole genome shotgun sequence
NZ_AAWL01000045
3.9 KB
0 CDS

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whole genome shotgun sequence
NZ_AAWL01000046
3.6 KB
0 CDS

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whole genome shotgun sequence
NZ_AAWL01000047
3.5 KB
4 CDS

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whole genome shotgun sequence
NZ_AAWL01000048
2.7 KB
0 CDS

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whole genome shotgun sequence
NZ_AAWL01000049
2.1 KB
3 CDS

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Taxonomy

External Links

Thermosinus carboxydivorans Nor1

Search Genome

Sequences

PubMed Search for Thermosinus carboxydivorans Nor1

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