Turicibacter sanguinis PC909

J. Craig Venter Institute

Genome Size: 3.0 megabases, GC Content: 34.1%, Released Date: March 30, 2010 #20748

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00036, whole genome shotgun sequence
NZ_ADMN01000001
2.6 KB
8 CDS

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contig00035, whole genome shotgun sequence
NZ_ADMN01000002
12.1 KB
20 CDS

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contig00105, whole genome shotgun sequence
NZ_ADMN01000003
28.7 KB
58 CDS

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contig00066, whole genome shotgun sequence
NZ_ADMN01000004
32.2 KB
64 CDS

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contig00023, whole genome shotgun sequence
NZ_ADMN01000005
1.3 KB
6 CDS

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contig00168, whole genome shotgun sequence
NZ_ADMN01000006
3.8 KB
6 CDS

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contig00074, whole genome shotgun sequence
NZ_ADMN01000007
19.3 KB
48 CDS

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contig00124, whole genome shotgun sequence
NZ_ADMN01000008
26.3 KB
46 CDS

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contig00007, whole genome shotgun sequence
NZ_ADMN01000009
2.0 KB
6 CDS

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contig00089, whole genome shotgun sequence
NZ_ADMN01000010
99.3 KB
228 CDS

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contig00029, whole genome shotgun sequence
NZ_ADMN01000011
61.9 KB
108 CDS

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contig00180, whole genome shotgun sequence
NZ_ADMN01000012
2.7 KB
10 CDS

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contig00118, whole genome shotgun sequence
NZ_ADMN01000013
38.0 KB
70 CDS

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contig00019, whole genome shotgun sequence
NZ_ADMN01000014
3.3 KB
6 CDS

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contig00075, whole genome shotgun sequence
NZ_ADMN01000015
27.3 KB
58 CDS

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contig00207, whole genome shotgun sequence
NZ_ADMN01000016
75.6 KB
152 CDS

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contig00017, whole genome shotgun sequence
NZ_ADMN01000017
11.1 KB
22 CDS

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contig00047, whole genome shotgun sequence
NZ_ADMN01000018
13.9 KB
22 CDS

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contig00058, whole genome shotgun sequence
NZ_ADMN01000019
3.0 KB
8 CDS

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contig00095, whole genome shotgun sequence
NZ_ADMN01000020
10.9 KB
20 CDS

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contig00077, whole genome shotgun sequence
NZ_ADMN01000021
16.6 KB
38 CDS

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contig00030, whole genome shotgun sequence
NZ_ADMN01000022
32.3 KB
62 CDS

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contig00113, whole genome shotgun sequence
NZ_ADMN01000023
33.4 KB
54 CDS

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contig00060, whole genome shotgun sequence
NZ_ADMN01000024
11.6 KB
28 CDS

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contig00064, whole genome shotgun sequence
NZ_ADMN01000025
1.8 KB
2 CDS

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contig00138, whole genome shotgun sequence
NZ_ADMN01000026
563 bytes
0 CDS

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contig00159, whole genome shotgun sequence
NZ_ADMN01000027
650 bytes
0 CDS

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contig00022, whole genome shotgun sequence
NZ_ADMN01000028
5.3 KB
12 CDS

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contig00139, whole genome shotgun sequence
NZ_ADMN01000029
3.0 KB
8 CDS

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contig00107, whole genome shotgun sequence
NZ_ADMN01000030
92.2 KB
170 CDS

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contig00129, whole genome shotgun sequence
NZ_ADMN01000031
4.0 KB
10 CDS

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contig00104, whole genome shotgun sequence
NZ_ADMN01000032
1.6 KB
2 CDS

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contig00010, whole genome shotgun sequence
NZ_ADMN01000033
11.7 KB
30 CDS

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contig00034, whole genome shotgun sequence
NZ_ADMN01000034
23.5 KB
42 CDS

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contig00148, whole genome shotgun sequence
NZ_ADMN01000035
14.9 KB
26 CDS

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contig00038, whole genome shotgun sequence
NZ_ADMN01000036
39.8 KB
76 CDS

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contig00012, whole genome shotgun sequence
NZ_ADMN01000037
25.6 KB
52 CDS

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contig00106, whole genome shotgun sequence
NZ_ADMN01000038
5.2 KB
10 CDS

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contig00087, whole genome shotgun sequence
NZ_ADMN01000039
1.8 KB
0 CDS

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contig00133, whole genome shotgun sequence
NZ_ADMN01000040
12.0 KB
24 CDS

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contig00051, whole genome shotgun sequence
NZ_ADMN01000041
23.9 KB
32 CDS

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contig00100, whole genome shotgun sequence
NZ_ADMN01000042
30.5 KB
48 CDS

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contig00110, whole genome shotgun sequence
NZ_ADMN01000043
48.7 KB
82 CDS

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contig00085, whole genome shotgun sequence
NZ_ADMN01000044
11.5 KB
10 CDS

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contig00132, whole genome shotgun sequence
NZ_ADMN01000045
16.6 KB
34 CDS

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contig00068, whole genome shotgun sequence
NZ_ADMN01000046
25.5 KB
52 CDS

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contig00032, whole genome shotgun sequence
NZ_ADMN01000047
27.0 KB
46 CDS

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contig00201, whole genome shotgun sequence
NZ_ADMN01000048
23.3 KB
46 CDS

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contig00053, whole genome shotgun sequence
NZ_ADMN01000049
10.4 KB
20 CDS

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contig00042, whole genome shotgun sequence
NZ_ADMN01000050
44.4 KB
82 CDS

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contig00067, whole genome shotgun sequence
NZ_ADMN01000051
34.3 KB
52 CDS

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contig00115, whole genome shotgun sequence
NZ_ADMN01000052
30.3 KB
58 CDS

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contig00158, whole genome shotgun sequence
NZ_ADMN01000053
14.5 KB
26 CDS

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contig00061, whole genome shotgun sequence
NZ_ADMN01000054
23.8 KB
46 CDS

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contig00044, whole genome shotgun sequence
NZ_ADMN01000055
16.6 KB
24 CDS

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contig00013, whole genome shotgun sequence
NZ_ADMN01000056
99.7 KB
182 CDS

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contig00016, whole genome shotgun sequence
NZ_ADMN01000057
102.9 KB
220 CDS

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contig00092, whole genome shotgun sequence
NZ_ADMN01000058
1.2 KB
4 CDS

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contig00055, whole genome shotgun sequence
NZ_ADMN01000059
29.1 KB
70 CDS

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contig00063, whole genome shotgun sequence
NZ_ADMN01000060
515 bytes
2 CDS

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contig00059, whole genome shotgun sequence
NZ_ADMN01000061
18.3 KB
38 CDS

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contig00121, whole genome shotgun sequence
NZ_ADMN01000062
543 bytes
0 CDS

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contig00076, whole genome shotgun sequence
NZ_ADMN01000063
1.2 KB
4 CDS

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contig00069, whole genome shotgun sequence
NZ_ADMN01000064
104.5 KB
188 CDS

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contig00048, whole genome shotgun sequence
NZ_ADMN01000065
75.4 KB
140 CDS

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contig00099, whole genome shotgun sequence
NZ_ADMN01000066
34.5 KB
72 CDS

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contig00084, whole genome shotgun sequence
NZ_ADMN01000067
40.2 KB
72 CDS

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contig00020, whole genome shotgun sequence
NZ_ADMN01000068
53.5 KB
108 CDS

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contig00065, whole genome shotgun sequence
NZ_ADMN01000069
16.7 KB
26 CDS

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contig00057, whole genome shotgun sequence
NZ_ADMN01000070
12.2 KB
28 CDS

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contig00070, whole genome shotgun sequence
NZ_ADMN01000071
568 bytes
2 CDS

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contig00073, whole genome shotgun sequence
NZ_ADMN01000072
14.8 KB
28 CDS

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contig00071, whole genome shotgun sequence
NZ_ADMN01000073
7.3 KB
24 CDS

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contig00001, whole genome shotgun sequence
NZ_ADMN01000074
2.8 KB
6 CDS

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contig00018, whole genome shotgun sequence
NZ_ADMN01000075
4.6 KB
8 CDS

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contig00160, whole genome shotgun sequence
NZ_ADMN01000076
13.0 KB
24 CDS

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contig00103, whole genome shotgun sequence
NZ_ADMN01000077
40.8 KB
74 CDS

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contig00033, whole genome shotgun sequence
NZ_ADMN01000078
46.0 KB
92 CDS

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contig00119, whole genome shotgun sequence
NZ_ADMN01000079
822 bytes
2 CDS

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contig00142, whole genome shotgun sequence
NZ_ADMN01000080
8.9 KB
16 CDS

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contig00093, whole genome shotgun sequence
NZ_ADMN01000081
10.6 KB
22 CDS

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contig00028, whole genome shotgun sequence
NZ_ADMN01000082
1.5 KB
2 CDS

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contig00181, whole genome shotgun sequence
NZ_ADMN01000083
697 bytes
2 CDS

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contig00031, whole genome shotgun sequence
NZ_ADMN01000084
5.3 KB
10 CDS

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contig00094, whole genome shotgun sequence
NZ_ADMN01000085
26.4 KB
44 CDS

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contig00081, whole genome shotgun sequence
NZ_ADMN01000086
19.5 KB
38 CDS

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contig00043, whole genome shotgun sequence
NZ_ADMN01000087
39.8 KB
70 CDS

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contig00015, whole genome shotgun sequence
NZ_ADMN01000088
15.9 KB
22 CDS

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contig00145, whole genome shotgun sequence
NZ_ADMN01000089
1.3 KB
2 CDS

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contig00072, whole genome shotgun sequence
NZ_ADMN01000090
9.3 KB
20 CDS

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contig00062, whole genome shotgun sequence
NZ_ADMN01000091
6.6 KB
12 CDS

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contig00052, whole genome shotgun sequence
NZ_ADMN01000092
32.2 KB
56 CDS

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contig00027, whole genome shotgun sequence
NZ_ADMN01000093
62.1 KB
112 CDS

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contig00205, whole genome shotgun sequence
NZ_ADMN01000094
1.1 KB
2 CDS

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contig00130, whole genome shotgun sequence
NZ_ADMN01000095
31.3 KB
66 CDS

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contig00056, whole genome shotgun sequence
NZ_ADMN01000096
4.5 KB
4 CDS

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contig00198, whole genome shotgun sequence
NZ_ADMN01000097
24.1 KB
66 CDS

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contig00189, whole genome shotgun sequence
NZ_ADMN01000098
5.2 KB
10 CDS

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contig00088, whole genome shotgun sequence
NZ_ADMN01000099
695 bytes
0 CDS

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contig00025, whole genome shotgun sequence
NZ_ADMN01000100
17.6 KB
42 CDS

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contig00045, whole genome shotgun sequence
NZ_ADMN01000101
41.3 KB
72 CDS

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contig00049, whole genome shotgun sequence
NZ_ADMN01000102
22.9 KB
42 CDS

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contig00026, whole genome shotgun sequence
NZ_ADMN01000103
14.5 KB
30 CDS

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contig00014, whole genome shotgun sequence
NZ_ADMN01000104
18.6 KB
38 CDS

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contig00131, whole genome shotgun sequence
NZ_ADMN01000105
821 bytes
2 CDS

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contig00114, whole genome shotgun sequence
NZ_ADMN01000106
24.2 KB
44 CDS

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contig00209, whole genome shotgun sequence
NZ_ADMN01000107
574 bytes
0 CDS

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contig00006, whole genome shotgun sequence
NZ_ADMN01000108
6.9 KB
12 CDS

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contig00098, whole genome shotgun sequence
NZ_ADMN01000109
52.2 KB
94 CDS

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contig00002, whole genome shotgun sequence
NZ_ADMN01000110
143.2 KB
294 CDS

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contig00039, whole genome shotgun sequence
NZ_ADMN01000111
19.4 KB
38 CDS

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contig00112, whole genome shotgun sequence
NZ_ADMN01000112
20.0 KB
38 CDS

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contig00143, whole genome shotgun sequence
NZ_ADMN01000113
1.3 KB
0 CDS

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contig00009, whole genome shotgun sequence
NZ_ADMN01000114
7.5 KB
8 CDS

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contig00054, whole genome shotgun sequence
NZ_ADMN01000115
35.1 KB
56 CDS

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contig00050, whole genome shotgun sequence
NZ_ADMN01000116
52.4 KB
122 CDS

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contig00008, whole genome shotgun sequence
NZ_ADMN01000117
18.8 KB
42 CDS

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contig00041, whole genome shotgun sequence
NZ_ADMN01000118
5.7 KB
14 CDS

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contig00116, whole genome shotgun sequence
NZ_ADMN01000119
46.6 KB
98 CDS

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contig00003, whole genome shotgun sequence
NZ_ADMN01000120
35.3 KB
66 CDS

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contig00037, whole genome shotgun sequence
NZ_ADMN01000121
30.7 KB
58 CDS

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contig00040, whole genome shotgun sequence
NZ_ADMN01000122
720 bytes
2 CDS

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contig00161, whole genome shotgun sequence
NZ_ADMN01000123
28.2 KB
60 CDS

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contig00046, whole genome shotgun sequence
NZ_ADMN01000124
10.4 KB
18 CDS

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contig00005, whole genome shotgun sequence
NZ_ADMN01000125
7.1 KB
12 CDS

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Taxonomy

External Links

Turicibacter sanguinis PC909

Search Genome

Sequences

PubMed Search for Turicibacter sanguinis PC909

Related Genomes