Veillonella dispar ATCC 17748

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 38.8%, Released Date: March 17, 2009 #18509

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACIK02000001
769 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000002
677 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000003
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000004
628.4 KB
571 CDS

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whole genome shotgun sequence
NZ_ACIK02000005
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000006
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000007
126.9 KB
134 CDS

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whole genome shotgun sequence
NZ_ACIK02000008
162.6 KB
148 CDS

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whole genome shotgun sequence
NZ_ACIK02000009
78.3 KB
81 CDS

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whole genome shotgun sequence
NZ_ACIK02000010
486.6 KB
475 CDS

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whole genome shotgun sequence
NZ_ACIK02000011
30.0 KB
26 CDS

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whole genome shotgun sequence
NZ_ACIK02000012
608 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACIK02000013
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACIK02000014
134.5 KB
127 CDS

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whole genome shotgun sequence
NZ_ACIK02000015
376 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000016
518 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000017
307 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACIK02000018
436 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000019
403.7 KB
388 CDS

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whole genome shotgun sequence
NZ_ACIK02000020
466 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000021
2.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000022
498 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000023
622 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000024
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACIK02000025
588 bytes
1 CDS

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Taxonomy

External Links

Veillonella dispar ATCC 17748

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Sequences

PubMed Search for Veillonella dispar ATCC 17748

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