Veillonella parvula ATCC 17745

J. Craig Venter Institute

Genome Size: 2.2 megabases, GC Content: 38.6%, Released Date: Dec. 30, 2009 #20751

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ADFU01000001
110.3 KB
60 CDS

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whole genome shotgun sequence
NZ_ADFU01000002
15.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ADFU01000003
52.3 KB
48 CDS

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whole genome shotgun sequence
NZ_ADFU01000004
756 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFU01000005
618 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADFU01000006
83.6 KB
91 CDS

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whole genome shotgun sequence
NZ_ADFU01000007
145.5 KB
137 CDS

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whole genome shotgun sequence
NZ_ADFU01000008
24.2 KB
18 CDS

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whole genome shotgun sequence
NZ_ADFU01000009
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFU01000010
532 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADFU01000011
428.7 KB
390 CDS

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whole genome shotgun sequence
NZ_ADFU01000012
407.1 KB
375 CDS

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whole genome shotgun sequence
NZ_ADFU01000013
117.8 KB
123 CDS

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whole genome shotgun sequence
NZ_ADFU01000014
132.8 KB
123 CDS

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whole genome shotgun sequence
NZ_ADFU01000015
19.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ADFU01000016
584 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADFU01000017
568.5 KB
537 CDS

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whole genome shotgun sequence
NZ_ADFU01000018
2.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ADFU01000019
650 bytes
0 CDS

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Taxonomy

External Links

Veillonella parvula ATCC 17745

Search Genome

Sequences

PubMed Search for Veillonella parvula ATCC 17745

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