Vibrio alginolyticus 12G01

J. Craig Venter Institute

Genome Size: 5.0 megabases, GC Content: 44.6%, Released Date: April 6, 2006 #18511

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAPS01000001
454.5 KB
415 CDS

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whole genome shotgun sequence
NZ_AAPS01000002
315.2 KB
310 CDS

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whole genome shotgun sequence
NZ_AAPS01000003
308.0 KB
282 CDS

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whole genome shotgun sequence
NZ_AAPS01000004
294.3 KB
297 CDS

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whole genome shotgun sequence
NZ_AAPS01000005
238.7 KB
270 CDS

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whole genome shotgun sequence
NZ_AAPS01000006
211.2 KB
182 CDS

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whole genome shotgun sequence
NZ_AAPS01000007
202.5 KB
158 CDS

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whole genome shotgun sequence
NZ_AAPS01000008
146.0 KB
140 CDS

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whole genome shotgun sequence
NZ_AAPS01000009
143.4 KB
125 CDS

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whole genome shotgun sequence
NZ_AAPS01000010
124.0 KB
124 CDS

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whole genome shotgun sequence
NZ_AAPS01000011
112.4 KB
105 CDS

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whole genome shotgun sequence
NZ_AAPS01000012
101.2 KB
89 CDS

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whole genome shotgun sequence
NZ_AAPS01000013
95.5 KB
96 CDS

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whole genome shotgun sequence
NZ_AAPS01000014
90.3 KB
82 CDS

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whole genome shotgun sequence
NZ_AAPS01000015
84.3 KB
84 CDS

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whole genome shotgun sequence
NZ_AAPS01000016
81.4 KB
85 CDS

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whole genome shotgun sequence
NZ_AAPS01000017
81.2 KB
87 CDS

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whole genome shotgun sequence
NZ_AAPS01000018
76.6 KB
68 CDS

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whole genome shotgun sequence
NZ_AAPS01000019
74.1 KB
63 CDS

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whole genome shotgun sequence
NZ_AAPS01000020
70.5 KB
69 CDS

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whole genome shotgun sequence
NZ_AAPS01000021
67.7 KB
72 CDS

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whole genome shotgun sequence
NZ_AAPS01000022
66.6 KB
57 CDS

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whole genome shotgun sequence
NZ_AAPS01000023
61.8 KB
54 CDS

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whole genome shotgun sequence
NZ_AAPS01000024
58.7 KB
46 CDS

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whole genome shotgun sequence
NZ_AAPS01000025
57.6 KB
50 CDS

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whole genome shotgun sequence
NZ_AAPS01000026
52.7 KB
48 CDS

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whole genome shotgun sequence
NZ_AAPS01000027
51.0 KB
51 CDS

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whole genome shotgun sequence
NZ_AAPS01000028
48.7 KB
42 CDS

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whole genome shotgun sequence
NZ_AAPS01000029
47.3 KB
46 CDS

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whole genome shotgun sequence
NZ_AAPS01000030
46.4 KB
52 CDS

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whole genome shotgun sequence
NZ_AAPS01000031
46.4 KB
45 CDS

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whole genome shotgun sequence
NZ_AAPS01000032
44.8 KB
41 CDS

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whole genome shotgun sequence
NZ_AAPS01000033
44.0 KB
40 CDS

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whole genome shotgun sequence
NZ_AAPS01000034
43.6 KB
42 CDS

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whole genome shotgun sequence
NZ_AAPS01000035
42.9 KB
24 CDS

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whole genome shotgun sequence
NZ_AAPS01000036
41.2 KB
34 CDS

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whole genome shotgun sequence
NZ_AAPS01000037
37.3 KB
32 CDS

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whole genome shotgun sequence
NZ_AAPS01000038
36.8 KB
35 CDS

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whole genome shotgun sequence
NZ_AAPS01000039
34.8 KB
33 CDS

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whole genome shotgun sequence
NZ_AAPS01000040
33.2 KB
32 CDS

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whole genome shotgun sequence
NZ_AAPS01000041
32.0 KB
21 CDS

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whole genome shotgun sequence
NZ_AAPS01000042
31.3 KB
33 CDS

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whole genome shotgun sequence
NZ_AAPS01000043
29.6 KB
26 CDS

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whole genome shotgun sequence
NZ_AAPS01000044
29.4 KB
30 CDS

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whole genome shotgun sequence
NZ_AAPS01000045
29.2 KB
25 CDS

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whole genome shotgun sequence
NZ_AAPS01000046
27.2 KB
22 CDS

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whole genome shotgun sequence
NZ_AAPS01000047
27.1 KB
24 CDS

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whole genome shotgun sequence
NZ_AAPS01000048
25.1 KB
27 CDS

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whole genome shotgun sequence
NZ_AAPS01000049
24.2 KB
29 CDS

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whole genome shotgun sequence
NZ_AAPS01000050
23.8 KB
21 CDS

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whole genome shotgun sequence
NZ_AAPS01000051
23.8 KB
22 CDS

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whole genome shotgun sequence
NZ_AAPS01000052
23.6 KB
23 CDS

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whole genome shotgun sequence
NZ_AAPS01000053
23.4 KB
24 CDS

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whole genome shotgun sequence
NZ_AAPS01000054
22.2 KB
6 CDS

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whole genome shotgun sequence
NZ_AAPS01000055
22.0 KB
22 CDS

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whole genome shotgun sequence
NZ_AAPS01000056
21.9 KB
26 CDS

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whole genome shotgun sequence
NZ_AAPS01000057
21.5 KB
17 CDS

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whole genome shotgun sequence
NZ_AAPS01000058
20.6 KB
19 CDS

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whole genome shotgun sequence
NZ_AAPS01000059
19.1 KB
21 CDS

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whole genome shotgun sequence
NZ_AAPS01000060
18.2 KB
16 CDS

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whole genome shotgun sequence
NZ_AAPS01000061
17.0 KB
14 CDS

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whole genome shotgun sequence
NZ_AAPS01000062
16.4 KB
18 CDS

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whole genome shotgun sequence
NZ_AAPS01000063
16.1 KB
16 CDS

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whole genome shotgun sequence
NZ_AAPS01000064
16.0 KB
16 CDS

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whole genome shotgun sequence
NZ_AAPS01000065
15.2 KB
15 CDS

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whole genome shotgun sequence
NZ_AAPS01000066
14.5 KB
9 CDS

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whole genome shotgun sequence
NZ_AAPS01000067
12.6 KB
13 CDS

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whole genome shotgun sequence
NZ_AAPS01000068
12.0 KB
8 CDS

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whole genome shotgun sequence
NZ_AAPS01000069
11.2 KB
6 CDS

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whole genome shotgun sequence
NZ_AAPS01000070
10.3 KB
10 CDS

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whole genome shotgun sequence
NZ_AAPS01000071
10.2 KB
11 CDS

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whole genome shotgun sequence
NZ_AAPS01000072
9.9 KB
12 CDS

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whole genome shotgun sequence
NZ_AAPS01000073
9.1 KB
9 CDS

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whole genome shotgun sequence
NZ_AAPS01000074
9.0 KB
5 CDS

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whole genome shotgun sequence
NZ_AAPS01000075
7.4 KB
17 CDS

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whole genome shotgun sequence
NZ_AAPS01000076
7.4 KB
9 CDS

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whole genome shotgun sequence
NZ_AAPS01000077
6.4 KB
7 CDS

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whole genome shotgun sequence
NZ_AAPS01000078
5.9 KB
6 CDS

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whole genome shotgun sequence
NZ_AAPS01000079
5.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000080
5.1 KB
5 CDS

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whole genome shotgun sequence
NZ_AAPS01000081
4.4 KB
5 CDS

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whole genome shotgun sequence
NZ_AAPS01000082
4.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000083
3.8 KB
0 CDS

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whole genome shotgun sequence
NZ_AAPS01000084
3.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000085
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000086
3.4 KB
7 CDS

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whole genome shotgun sequence
NZ_AAPS01000087
3.1 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000088
2.9 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000089
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000090
2.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000091
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000092
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000093
2.1 KB
4 CDS

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whole genome shotgun sequence
NZ_AAPS01000094
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000095
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000096
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000097
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000098
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000099
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_AAPS01000100
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_AAPS01000101
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_AAPS01000102
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000103
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000104
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_AAPS01000105
991 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAPS01000106
916 bytes
1 CDS

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Taxonomy

External Links

Vibrio alginolyticus 12G01

Search Genome

Sequences

PubMed Search for Vibrio alginolyticus 12G01

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