Vibrionales bacterium SWAT-3

J. Craig Venter Institute

GC Content: 44.5%, Released Date: April 26, 2007 #18541

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAZW01000001
422.2 KB
375 CDS

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whole genome shotgun sequence
NZ_AAZW01000002
284.1 KB
259 CDS

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whole genome shotgun sequence
NZ_AAZW01000003
270.0 KB
269 CDS

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whole genome shotgun sequence
NZ_AAZW01000004
178.5 KB
173 CDS

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whole genome shotgun sequence
NZ_AAZW01000005
151.7 KB
141 CDS

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whole genome shotgun sequence
NZ_AAZW01000006
146.1 KB
144 CDS

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whole genome shotgun sequence
NZ_AAZW01000007
141.7 KB
159 CDS

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whole genome shotgun sequence
NZ_AAZW01000008
139.6 KB
122 CDS

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whole genome shotgun sequence
NZ_AAZW01000009
132.8 KB
130 CDS

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whole genome shotgun sequence
NZ_AAZW01000010
118.1 KB
106 CDS

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whole genome shotgun sequence
NZ_AAZW01000011
115.7 KB
109 CDS

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whole genome shotgun sequence
NZ_AAZW01000012
113.8 KB
113 CDS

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whole genome shotgun sequence
NZ_AAZW01000013
107.2 KB
108 CDS

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whole genome shotgun sequence
NZ_AAZW01000014
105.0 KB
96 CDS

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whole genome shotgun sequence
NZ_AAZW01000015
100.7 KB
88 CDS

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whole genome shotgun sequence
NZ_AAZW01000016
85.6 KB
85 CDS

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whole genome shotgun sequence
NZ_AAZW01000017
85.0 KB
70 CDS

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whole genome shotgun sequence
NZ_AAZW01000018
79.2 KB
76 CDS

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whole genome shotgun sequence
NZ_AAZW01000019
78.7 KB
69 CDS

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whole genome shotgun sequence
NZ_AAZW01000020
77.7 KB
64 CDS

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whole genome shotgun sequence
NZ_AAZW01000021
75.8 KB
68 CDS

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whole genome shotgun sequence
NZ_AAZW01000022
75.4 KB
63 CDS

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whole genome shotgun sequence
NZ_AAZW01000023
74.9 KB
85 CDS

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whole genome shotgun sequence
NZ_AAZW01000024
67.5 KB
58 CDS

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whole genome shotgun sequence
NZ_AAZW01000025
66.6 KB
62 CDS

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whole genome shotgun sequence
NZ_AAZW01000026
65.4 KB
62 CDS

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whole genome shotgun sequence
NZ_AAZW01000027
63.8 KB
68 CDS

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whole genome shotgun sequence
NZ_AAZW01000028
60.4 KB
61 CDS

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whole genome shotgun sequence
NZ_AAZW01000029
57.3 KB
53 CDS

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whole genome shotgun sequence
NZ_AAZW01000030
56.7 KB
55 CDS

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whole genome shotgun sequence
NZ_AAZW01000031
56.3 KB
73 CDS

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whole genome shotgun sequence
NZ_AAZW01000032
55.2 KB
48 CDS

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whole genome shotgun sequence
NZ_AAZW01000033
53.0 KB
50 CDS

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whole genome shotgun sequence
NZ_AAZW01000034
50.6 KB
45 CDS

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whole genome shotgun sequence
NZ_AAZW01000035
49.5 KB
52 CDS

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whole genome shotgun sequence
NZ_AAZW01000036
48.7 KB
51 CDS

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whole genome shotgun sequence
NZ_AAZW01000037
44.7 KB
42 CDS

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whole genome shotgun sequence
NZ_AAZW01000038
44.0 KB
40 CDS

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whole genome shotgun sequence
NZ_AAZW01000039
43.9 KB
39 CDS

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whole genome shotgun sequence
NZ_AAZW01000040
42.6 KB
39 CDS

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whole genome shotgun sequence
NZ_AAZW01000041
42.2 KB
31 CDS

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whole genome shotgun sequence
NZ_AAZW01000042
42.0 KB
38 CDS

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whole genome shotgun sequence
NZ_AAZW01000043
42.0 KB
40 CDS

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whole genome shotgun sequence
NZ_AAZW01000044
41.7 KB
44 CDS

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whole genome shotgun sequence
NZ_AAZW01000045
41.5 KB
41 CDS

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whole genome shotgun sequence
NZ_AAZW01000046
41.0 KB
36 CDS

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whole genome shotgun sequence
NZ_AAZW01000047
39.1 KB
18 CDS

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whole genome shotgun sequence
NZ_AAZW01000048
38.0 KB
35 CDS

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whole genome shotgun sequence
NZ_AAZW01000049
36.6 KB
32 CDS

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whole genome shotgun sequence
NZ_AAZW01000050
36.6 KB
40 CDS

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whole genome shotgun sequence
NZ_AAZW01000051
36.0 KB
34 CDS

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whole genome shotgun sequence
NZ_AAZW01000052
35.2 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZW01000053
33.8 KB
34 CDS

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whole genome shotgun sequence
NZ_AAZW01000054
32.7 KB
38 CDS

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whole genome shotgun sequence
NZ_AAZW01000055
32.4 KB
29 CDS

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whole genome shotgun sequence
NZ_AAZW01000056
31.8 KB
33 CDS

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whole genome shotgun sequence
NZ_AAZW01000057
31.1 KB
27 CDS

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whole genome shotgun sequence
NZ_AAZW01000058
30.9 KB
23 CDS

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whole genome shotgun sequence
NZ_AAZW01000059
29.6 KB
26 CDS

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whole genome shotgun sequence
NZ_AAZW01000060
29.4 KB
27 CDS

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whole genome shotgun sequence
NZ_AAZW01000061
29.1 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZW01000062
29.0 KB
22 CDS

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whole genome shotgun sequence
NZ_AAZW01000063
27.4 KB
31 CDS

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whole genome shotgun sequence
NZ_AAZW01000064
27.3 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZW01000065
24.2 KB
22 CDS

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whole genome shotgun sequence
NZ_AAZW01000066
23.9 KB
25 CDS

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whole genome shotgun sequence
NZ_AAZW01000067
23.9 KB
27 CDS

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whole genome shotgun sequence
NZ_AAZW01000068
23.3 KB
20 CDS

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whole genome shotgun sequence
NZ_AAZW01000069
23.2 KB
23 CDS

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whole genome shotgun sequence
NZ_AAZW01000070
23.0 KB
17 CDS

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whole genome shotgun sequence
NZ_AAZW01000071
22.7 KB
30 CDS

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whole genome shotgun sequence
NZ_AAZW01000072
22.2 KB
22 CDS

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whole genome shotgun sequence
NZ_AAZW01000073
21.8 KB
13 CDS

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whole genome shotgun sequence
NZ_AAZW01000074
20.5 KB
19 CDS

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whole genome shotgun sequence
NZ_AAZW01000075
20.5 KB
14 CDS

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whole genome shotgun sequence
NZ_AAZW01000076
20.5 KB
20 CDS

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whole genome shotgun sequence
NZ_AAZW01000077
20.4 KB
25 CDS

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whole genome shotgun sequence
NZ_AAZW01000078
19.8 KB
19 CDS

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whole genome shotgun sequence
NZ_AAZW01000079
19.7 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZW01000080
16.8 KB
9 CDS

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whole genome shotgun sequence
NZ_AAZW01000081
16.6 KB
23 CDS

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whole genome shotgun sequence
NZ_AAZW01000082
16.2 KB
18 CDS

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whole genome shotgun sequence
NZ_AAZW01000083
16.1 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZW01000084
15.8 KB
24 CDS

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whole genome shotgun sequence
NZ_AAZW01000085
15.6 KB
16 CDS

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whole genome shotgun sequence
NZ_AAZW01000086
15.3 KB
14 CDS

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whole genome shotgun sequence
NZ_AAZW01000087
15.0 KB
13 CDS

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whole genome shotgun sequence
NZ_AAZW01000088
14.9 KB
14 CDS

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whole genome shotgun sequence
NZ_AAZW01000089
13.4 KB
13 CDS

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whole genome shotgun sequence
NZ_AAZW01000090
13.4 KB
13 CDS

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whole genome shotgun sequence
NZ_AAZW01000091
13.3 KB
12 CDS

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whole genome shotgun sequence
NZ_AAZW01000092
13.1 KB
15 CDS

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whole genome shotgun sequence
NZ_AAZW01000093
12.3 KB
12 CDS

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whole genome shotgun sequence
NZ_AAZW01000094
10.9 KB
12 CDS

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whole genome shotgun sequence
NZ_AAZW01000095
10.9 KB
10 CDS

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whole genome shotgun sequence
NZ_AAZW01000096
10.8 KB
10 CDS

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whole genome shotgun sequence
NZ_AAZW01000097
10.4 KB
11 CDS

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whole genome shotgun sequence
NZ_AAZW01000098
10.2 KB
10 CDS

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whole genome shotgun sequence
NZ_AAZW01000099
9.5 KB
10 CDS

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whole genome shotgun sequence
NZ_AAZW01000100
9.2 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZW01000101
9.1 KB
5 CDS

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whole genome shotgun sequence
NZ_AAZW01000102
9.1 KB
10 CDS

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whole genome shotgun sequence
NZ_AAZW01000103
8.6 KB
9 CDS

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whole genome shotgun sequence
NZ_AAZW01000104
8.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000105
8.4 KB
9 CDS

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whole genome shotgun sequence
NZ_AAZW01000106
7.7 KB
16 CDS

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whole genome shotgun sequence
NZ_AAZW01000107
7.1 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZW01000108
6.5 KB
9 CDS

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whole genome shotgun sequence
NZ_AAZW01000109
5.9 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZW01000110
5.6 KB
8 CDS

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whole genome shotgun sequence
NZ_AAZW01000111
5.5 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000112
5.3 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000113
3.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000114
3.0 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000115
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000116
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_AAZW01000117
2.7 KB
6 CDS

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whole genome shotgun sequence
NZ_AAZW01000118
2.6 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000119
2.6 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000120
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000121
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000122
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000123
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000124
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000125
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000126
2.3 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000127
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000128
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000129
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000130
2.2 KB
7 CDS

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whole genome shotgun sequence
NZ_AAZW01000131
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000132
2.1 KB
5 CDS

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whole genome shotgun sequence
NZ_AAZW01000133
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000134
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZW01000135
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000136
1.8 KB
4 CDS

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whole genome shotgun sequence
NZ_AAZW01000137
1.7 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000138
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_AAZW01000139
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAZW01000140
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000141
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000142
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZW01000143
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000144
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAZW01000145
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000146
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000147
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AAZW01000148
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000149
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AAZW01000150
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000151
1022 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAZW01000152
1017 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAZW01000153
945 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAZW01000154
754 bytes
1 CDS

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Taxonomy

External Links

Vibrionales bacterium SWAT-3

Search Genome

Sequences

PubMed Search for Vibrionales bacterium SWAT-3

Related Genomes