Weissella paramesenteroides ATCC 33313

Baylor College of Medicine

GC Content: 37.9%, Released Date: April 20, 2009 #18543

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACKU01000001
1.4 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000002
89.7 KB
85 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000003
6.3 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000004
63.5 KB
107 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000005
184.3 KB
183 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000006
40.6 KB
39 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000007
148.2 KB
151 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000008
176.0 KB
181 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000009
5.3 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000010
42.6 KB
41 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000011
2.4 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000012
104.4 KB
121 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000013
88.9 KB
90 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000014
263.3 KB
234 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000015
7.4 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000016
802 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000017
1.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000018
3.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000019
62.9 KB
64 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000020
21.4 KB
19 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000021
27.2 KB
29 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000022
58.0 KB
57 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000023
6.1 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000024
1.3 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000025
1.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000026
17.1 KB
22 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000027
1.6 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000028
30.6 KB
32 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000029
14.8 KB
18 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000030
60.6 KB
52 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000031
28.9 KB
28 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000032
158.0 KB
153 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000033
87.4 KB
105 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000034
26.3 KB
25 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000035
833 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACKU01000036
82.4 KB
84 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Weissella paramesenteroides ATCC 33313

Search Genome

Sequences

PubMed Search for Weissella paramesenteroides ATCC 33313

Related Genomes