Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

Yale Univ.

Genome Size: 0.7 megabases, GC Content: 22.5%, Released Date: Sept. 10, 2002 #17619

Completed genome

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Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

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Sequences

complete genome
NC_004344
681.4 KB
611 CDS

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plasmid pWb1
NC_003425
5.2 KB
6 CDS

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References

Genome sequence of the endocellular obligate symbiont of tsetse flies, Wigglesworthia glossinidia
Akman,L., Yamashita,A., Watanabe,H., Oshima,K., Shiba,T., Hattori,M. and Aksoy,S. Nat. Genet. 32, 402-407 (2002)
PubMed, PubGet, HubMed

Taxonomy

External Links

Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis

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Sequences

References

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