Xylella fastidiosa Dixon

DOE Joint Genome Institute

Genome Size: 2.62 megabases, GC Content: 52.0%, Released Date: July 10, 2002 #18552

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAAL02000001
687.1 KB
633 CDS

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whole genome shotgun sequence
NZ_AAAL02000002
337.7 KB
288 CDS

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whole genome shotgun sequence
NZ_AAAL02000003
247.5 KB
219 CDS

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whole genome shotgun sequence
NZ_AAAL02000004
197.1 KB
188 CDS

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whole genome shotgun sequence
NZ_AAAL02000005
139.3 KB
123 CDS

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whole genome shotgun sequence
NZ_AAAL02000006
95.3 KB
76 CDS

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whole genome shotgun sequence
NZ_AAAL02000007
89.6 KB
66 CDS

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whole genome shotgun sequence
NZ_AAAL02000008
88.3 KB
82 CDS

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whole genome shotgun sequence
NZ_AAAL02000009
82.2 KB
81 CDS

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whole genome shotgun sequence
NZ_AAAL02000010
79.4 KB
74 CDS

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whole genome shotgun sequence
NZ_AAAL02000011
79.0 KB
77 CDS

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whole genome shotgun sequence
NZ_AAAL02000012
71.7 KB
67 CDS

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whole genome shotgun sequence
NZ_AAAL02000013
68.8 KB
77 CDS

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whole genome shotgun sequence
NZ_AAAL02000014
64.0 KB
60 CDS

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whole genome shotgun sequence
NZ_AAAL02000015
59.2 KB
44 CDS

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whole genome shotgun sequence
NZ_AAAL02000016
38.8 KB
35 CDS

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whole genome shotgun sequence
NZ_AAAL02000017
33.5 KB
26 CDS

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whole genome shotgun sequence
NZ_AAAL02000018
23.8 KB
27 CDS

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whole genome shotgun sequence
NZ_AAAL02000019
12.7 KB
17 CDS

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whole genome shotgun sequence
NZ_AAAL02000020
12.1 KB
15 CDS

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whole genome shotgun sequence
NZ_AAAL02000021
12.0 KB
17 CDS

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whole genome shotgun sequence
NZ_AAAL02000022
7.7 KB
12 CDS

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whole genome shotgun sequence
NZ_AAAL02000023
6.0 KB
12 CDS

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whole genome shotgun sequence
NZ_AAAL02000024
5.9 KB
6 CDS

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whole genome shotgun sequence
NZ_AAAL02000025
3.9 KB
6 CDS

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whole genome shotgun sequence
NZ_AAAL02000026
3.2 KB
7 CDS

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whole genome shotgun sequence
NZ_AAAL02000027
3.2 KB
7 CDS

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whole genome shotgun sequence
NZ_AAAL02000028
3.1 KB
5 CDS

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whole genome shotgun sequence
NZ_AAAL02000029
2.6 KB
5 CDS

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whole genome shotgun sequence
NZ_AAAL02000030
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAAL02000031
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_AAAL02000032
2.0 KB
0 CDS

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Taxonomy

External Links

Xylella fastidiosa Dixon

Search Genome

Sequences

PubMed Search for Xylella fastidiosa Dixon

Related Genomes