Lactobacillales
- Abiotrophia defectiva ATCC 49176 (incomplete)
- Aerococcus viridans (incomplete)
- Carnobacterium sp. AT7 (incomplete)
- Enterococcus casseliflavus EC10 (incomplete)
- Enterococcus casseliflavus EC20 (incomplete)
- Enterococcus casseliflavus EC30 (incomplete)
- Enterococcus faecalis AR01/DG (incomplete)
- Enterococcus faecalis ATCC 29200 (incomplete)
- Enterococcus faecalis ATCC 4200 (incomplete)
- Enterococcus faecalis CH188 (incomplete)
- Enterococcus faecalis D6 (incomplete)
- Enterococcus faecalis DAPTO 512 (incomplete)
- Enterococcus faecalis DAPTO 516 (incomplete)
- Enterococcus faecalis DS5 (incomplete)
- Enterococcus faecalis E1Sol (incomplete)
- Enterococcus faecalis Fly1 (incomplete)
- Enterococcus faecalis HH22 (incomplete)
- Enterococcus faecalis HIP11704 (incomplete)
- Enterococcus faecalis JH1 (incomplete)
- Enterococcus faecalis Merz96 (incomplete)
- Enterococcus faecalis OG1RF (incomplete)
- Enterococcus faecalis PC4.1 (incomplete)
- Enterococcus faecalis R712 (incomplete)
- Enterococcus faecalis S613 (incomplete)
- Enterococcus faecalis T1 (incomplete)
- Enterococcus faecalis T11 (incomplete)
- Enterococcus faecalis T2 (incomplete)
- Enterococcus faecalis T3 (incomplete)
- Enterococcus faecalis T8 (incomplete)
- Enterococcus faecalis TUSoD Ef11 (incomplete)
- Enterococcus faecalis TX0012 (incomplete)
- Enterococcus faecalis TX0017 (incomplete)
- Enterococcus faecalis TX0027 (incomplete)
- Enterococcus faecalis TX0031 (incomplete)
- Enterococcus faecalis TX0043 (incomplete)
- Enterococcus faecalis TX0102 (incomplete)
- Enterococcus faecalis TX0104 (incomplete)
- Enterococcus faecalis TX0109 (incomplete)
- Enterococcus faecalis TX0309A (incomplete)
- Enterococcus faecalis TX0309B (incomplete)
- Enterococcus faecalis TX0312 (incomplete)
- Enterococcus faecalis TX0411 (incomplete)
- Enterococcus faecalis TX0470 (incomplete)
- Enterococcus faecalis TX0630 (incomplete)
- Enterococcus faecalis TX0635 (incomplete)
- Enterococcus faecalis TX0645 (incomplete)
- Enterococcus faecalis TX0855 (incomplete)
- Enterococcus faecalis TX0860 (incomplete)
- Enterococcus faecalis TX1302 (incomplete)
- Enterococcus faecalis TX1322 (incomplete)
- Enterococcus faecalis TX1341 (incomplete)
- Enterococcus faecalis TX1342 (incomplete)
- Enterococcus faecalis TX1346 (incomplete)
- Enterococcus faecalis TX2134 (incomplete)
- Enterococcus faecalis TX2137 (incomplete)
- Enterococcus faecalis TX2141 (incomplete)
- Enterococcus faecalis TX4000 (incomplete)
- Enterococcus faecalis TX4244 (incomplete)
- Enterococcus faecalis TX4248 (incomplete)
- Enterococcus faecalis V583 (complete)
- Enterococcus faecalis X98 (incomplete)
- Enterococcus faecium 1,141,733 (incomplete)
- Enterococcus faecium 1,230,933 (incomplete)
- Enterococcus faecium 1,231,408 (incomplete)
- Enterococcus faecium 1,231,410 (incomplete)
- Enterococcus faecium 1,231,501 (incomplete)
- Enterococcus faecium 1,231,502 (incomplete)
- Enterococcus faecium C68 (incomplete)
- Enterococcus faecium Com12 (incomplete)
- Enterococcus faecium Com15 (incomplete)
- Enterococcus faecium D344SRF (incomplete)
- Enterococcus faecium DO (incomplete)
- Enterococcus faecium DO (incomplete)
- Enterococcus faecium E1039 (incomplete)
- Enterococcus faecium E1071 (incomplete)
- Enterococcus faecium E1162 (incomplete)
- Enterococcus faecium E1636 (incomplete)
- Enterococcus faecium E1679 (incomplete)
- Enterococcus faecium E980 (incomplete)
- Enterococcus faecium TC 6 (incomplete)
- Enterococcus faecium TX0082 (incomplete)
- Enterococcus faecium TX0133A (incomplete)
- Enterococcus faecium TX0133B (incomplete)
- Enterococcus faecium TX0133C (incomplete)
- Enterococcus faecium TX0133a01 (incomplete)
- Enterococcus faecium TX0133a04 (incomplete)
- Enterococcus faecium TX1330 (incomplete)
- Enterococcus faecium U0317 (incomplete)
- Enterococcus gallinarum EG2 (incomplete)
- Enterococcus italicus DSM 15952 (incomplete)
- Enterococcus sp. 7L76 (complete)
- Eremococcus coleocola ACS-139-V-Col8 (incomplete)
- Granulicatella adiacens ATCC 49175 (incomplete)
- Granulicatella elegans ATCC 700633 (incomplete)
- Lactobacillus acidophilus ATCC 4796 (incomplete)
- Lactobacillus acidophilus NCFM (complete)
- Lactobacillus amylolyticus DSM 11664 (incomplete)
- Lactobacillus amylovorus GRL 1112 (complete)
- Lactobacillus animalis KCTC 3501 (incomplete)
- Lactobacillus antri DSM 16041 (incomplete)
- Lactobacillus brevis ATCC 367 (complete)
- Lactobacillus brevis subsp. gravesensis ATCC 27305 (incomplete)
- Lactobacillus buchneri ATCC 11577 (incomplete)
- Lactobacillus casei ATCC 334 (complete)
- Lactobacillus casei BL23 (complete)
- Lactobacillus casei str. Zhang (complete)
- Lactobacillus coleohominis 101-4-CHN (incomplete)
- Lactobacillus coryniformis subsp. coryniformis KCTC 3167 (incomplete)
- Lactobacillus coryniformis subsp. torquens KCTC 3535 (incomplete)
- Lactobacillus crispatus 125-2-CHN (incomplete)
- Lactobacillus crispatus 214-1 (incomplete)
- Lactobacillus crispatus CTV-05 (incomplete)
- Lactobacillus crispatus JV-V01 (incomplete)
- Lactobacillus crispatus MV-1A-US (incomplete)
- Lactobacillus crispatus MV-3A-US (incomplete)
- Lactobacillus crispatus SJ-3C-US (incomplete)
- Lactobacillus crispatus ST1 (complete)
- Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (complete)
- Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 (complete)
- Lactobacillus delbrueckii subsp. bulgaricus ND02 (complete)
- Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4 (incomplete)
- Lactobacillus farciminis KCTC 3681 (incomplete)
- Lactobacillus fermentum 28-3-CHN (incomplete)
- Lactobacillus fermentum ATCC 14931 (incomplete)
- Lactobacillus fermentum CECT 5716 (complete)
- Lactobacillus fermentum IFO 3956 (complete)
- Lactobacillus gasseri 202-4 (incomplete)
- Lactobacillus gasseri 224-1 (incomplete)
- Lactobacillus gasseri ATCC 33323 (complete)
- Lactobacillus gasseri JV-V03 (incomplete)
- Lactobacillus gasseri MV-22 (incomplete)
- Lactobacillus gasseri SJ-9E-US (incomplete)
- Lactobacillus gasseri SV-16A-US (incomplete)
- Lactobacillus helveticus DPC 4571 (complete)
- Lactobacillus helveticus DSM 20075 (incomplete)
- Lactobacillus hilgardii ATCC 8290 (incomplete)
- Lactobacillus iners AB-1 (incomplete)
- Lactobacillus iners ATCC 55195 (incomplete)
- Lactobacillus iners DSM 13335 (incomplete)
- Lactobacillus iners LEAF 2052A-d (incomplete)
- Lactobacillus iners LEAF 2053A-b (incomplete)
- Lactobacillus iners LEAF 2062A-h1 (incomplete)
- Lactobacillus iners LEAF 3008A-a (incomplete)
- Lactobacillus iners LactinV 01V1-a (incomplete)
- Lactobacillus iners LactinV 03V1-b (incomplete)
- Lactobacillus iners LactinV 09V1-c (incomplete)
- Lactobacillus iners LactinV 11V1-d (incomplete)
- Lactobacillus iners SPIN 2503V10-D (incomplete)
- Lactobacillus jensenii 115-3-CHN (incomplete)
- Lactobacillus jensenii 1153 (incomplete)
- Lactobacillus jensenii 208-1 (incomplete)
- Lactobacillus jensenii 269-3 (incomplete)
- Lactobacillus jensenii 27-2-CHN (incomplete)
- Lactobacillus jensenii JV-V16 (incomplete)
- Lactobacillus jensenii SJ-7A-US (incomplete)
- Lactobacillus johnsonii ATCC 33200 (incomplete)
- Lactobacillus johnsonii FI9785 (complete)
- Lactobacillus johnsonii NCC 533 (complete)
- Lactobacillus oris PB013-T2-3 (incomplete)
- Lactobacillus paracasei subsp. paracasei 8700:2 (incomplete)
- Lactobacillus paracasei subsp. paracasei ATCC 25302 (incomplete)
- Lactobacillus plantarum JDM1 (complete)
- Lactobacillus plantarum WCFS1 (complete)
- Lactobacillus plantarum subsp. plantarum ATCC 14917 (incomplete)
- Lactobacillus plantarum subsp. plantarum ST-III (complete)
- Lactobacillus reuteri 100-23 (incomplete)
- Lactobacillus reuteri CF48-3A (incomplete)
- Lactobacillus reuteri DSM 20016 (complete)
- Lactobacillus reuteri JCM 1112 (complete)
- Lactobacillus reuteri MM2-3 (incomplete)
- Lactobacillus reuteri MM4-1A (incomplete)
- Lactobacillus reuteri SD2112 (incomplete)
- Lactobacillus reuteri lpuph (incomplete)
- Lactobacillus reuteri mlc3 (incomplete)
- Lactobacillus rhamnosus GG (complete)
- Lactobacillus rhamnosus GG (complete)
- Lactobacillus rhamnosus HN001 (incomplete)
- Lactobacillus rhamnosus LMS2-1 (incomplete)
- Lactobacillus rhamnosus Lc 705 (complete)
- Lactobacillus ruminis ATCC 25644 (incomplete)
- Lactobacillus sakei subsp. sakei 23K (complete)
- Lactobacillus salivarius ACS-116-V-Col5a (incomplete)
- Lactobacillus salivarius ATCC 11741 (incomplete)
- Lactobacillus salivarius CECT 5713 (complete)
- Lactobacillus salivarius UCC118 (complete)
- Lactobacillus ultunensis DSM 16047 (incomplete)
- Lactobacillus vaginalis ATCC 49540 (incomplete)
- Lactococcus lactis subsp. cremoris MG1363 (complete)
- Lactococcus lactis subsp. cremoris NZ9000 (complete)
- Lactococcus lactis subsp. cremoris SK11 (complete)
- Lactococcus lactis subsp. lactis Il1403 (complete)
- Lactococcus lactis subsp. lactis KF147 (complete)
- Leuconostoc argentinum KCTC 3773 (incomplete)
- Leuconostoc citreum KM20 (complete)
- Leuconostoc fallax KCTC 3537 (incomplete)
- Leuconostoc gasicomitatum LMG 18811 (complete)
- Leuconostoc gelidum KCTC 3527 (incomplete)
- Leuconostoc inhae KCTC 3774 (incomplete)
- Leuconostoc kimchii IMSNU 11154 (complete)
- Leuconostoc mesenteroides subsp. cremoris ATCC 19254 (incomplete)
- Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (complete)
- Oenococcus oeni ATCC BAA-1163 (incomplete)
- Oenococcus oeni AWRIB429 (incomplete)
- Oenococcus oeni PSU-1 (complete)
- Pediococcus acidilactici 7_4 (incomplete)
- Pediococcus acidilactici DSM 20284 (incomplete)
- Pediococcus pentosaceus ATCC 25745 (complete)
- Streptococcus agalactiae 18RS21 (incomplete)
- Streptococcus agalactiae 2603V/R (complete)
- Streptococcus agalactiae 515 (incomplete)
- Streptococcus agalactiae A909 (complete)
- Streptococcus agalactiae CJB111 (incomplete)
- Streptococcus agalactiae COH1 (incomplete)
- Streptococcus agalactiae H36B (incomplete)
- Streptococcus agalactiae NEM316 (complete)
- Streptococcus anginosus F0211 (incomplete)
- Streptococcus bovis ATCC 700338 (incomplete)
- Streptococcus downei F0415 (incomplete)
- Streptococcus dysgalactiae subsp. equisimilis GGS_124 (complete)
- Streptococcus equi subsp. equi 4047 (complete)
- Streptococcus equi subsp. zooepidemicus (complete)
- Streptococcus equi subsp. zooepidemicus BHS5 (incomplete)
- Streptococcus equi subsp. zooepidemicus MGCS10565 (complete)
- Streptococcus gallolyticus UCN34 (complete)
- Streptococcus gallolyticus subsp. gallolyticus TX20005 (incomplete)
- Streptococcus gordonii str. Challis substr. CH1 (complete)
- Streptococcus infantarius subsp. infantarius ATCC BAA-102 (incomplete)
- Streptococcus infantis SK1302 (incomplete)
- Streptococcus mitis ATCC 6249 (incomplete)
- Streptococcus mitis B6 (complete)
- Streptococcus mitis NCTC 12261 (incomplete)
- Streptococcus mitis SK321 (incomplete)
- Streptococcus mitis SK564 (incomplete)
- Streptococcus mitis SK597 (incomplete)
- Streptococcus mutans NN2025 (complete)
- Streptococcus mutans UA159 (complete)
- Streptococcus oralis (incomplete)
- Streptococcus oralis ATCC 35037 (incomplete)
- Streptococcus parasanguinis ATCC 15912 (incomplete)
- Streptococcus parasanguinis F0405 (incomplete)
- Streptococcus pneumoniae 06-01-003MEF (incomplete)
- Streptococcus pneumoniae 670-6B (complete)
- Streptococcus pneumoniae 70585 (complete)
- Streptococcus pneumoniae AP200 (complete)
- Streptococcus pneumoniae ATCC 700669 (complete)
- Streptococcus pneumoniae BS397 (incomplete)
- Streptococcus pneumoniae BS455 (incomplete)
- Streptococcus pneumoniae BS457 (incomplete)
- Streptococcus pneumoniae BS458 (incomplete)
- Streptococcus pneumoniae CCRI 1974 (incomplete)
- Streptococcus pneumoniae CCRI 1974M2 (incomplete)
- Streptococcus pneumoniae CDC0288-04 (incomplete)
- Streptococcus pneumoniae CDC1087-00 (incomplete)
- Streptococcus pneumoniae CDC1873-00 (incomplete)
- Streptococcus pneumoniae CDC3059-06 (incomplete)
- Streptococcus pneumoniae CGSP14 (complete)
- Streptococcus pneumoniae D39 (complete)
- Streptococcus pneumoniae G54 (complete)
- Streptococcus pneumoniae Hungary19A-6 (complete)
- Streptococcus pneumoniae INV104 (complete)
- Streptococcus pneumoniae INV200 (complete)
- Streptococcus pneumoniae JJA (complete)
- Streptococcus pneumoniae MLV-016 (incomplete)
- Streptococcus pneumoniae OXC141 (complete)
- Streptococcus pneumoniae P1031 (complete)
- Streptococcus pneumoniae R6 (complete)
- Streptococcus pneumoniae SP-BS293 (incomplete)
- Streptococcus pneumoniae SP11-BS70 (incomplete)
- Streptococcus pneumoniae SP14-BS292 (incomplete)
- Streptococcus pneumoniae SP14-BS69 (incomplete)
- Streptococcus pneumoniae SP18-BS74 (incomplete)
- Streptococcus pneumoniae SP19-BS75 (incomplete)
- Streptococcus pneumoniae SP195 (incomplete)
- Streptococcus pneumoniae SP23-BS72 (incomplete)
- Streptococcus pneumoniae SP3-BS71 (incomplete)
- Streptococcus pneumoniae SP6-BS73 (incomplete)
- Streptococcus pneumoniae SP9-BS68 (incomplete)
- Streptococcus pneumoniae SPN021198 (incomplete)
- Streptococcus pneumoniae SPN032672 (incomplete)
- Streptococcus pneumoniae SPN033038 (incomplete)
- Streptococcus pneumoniae SPN034156 (incomplete)
- Streptococcus pneumoniae SPN034183 (incomplete)
- Streptococcus pneumoniae SPN061370 (incomplete)
- Streptococcus pneumoniae SPN072838 (incomplete)
- Streptococcus pneumoniae SPN1041 (incomplete)
- Streptococcus pneumoniae SPN7465 (incomplete)
- Streptococcus pneumoniae SPN994038 (incomplete)
- Streptococcus pneumoniae SPN994039 (incomplete)
- Streptococcus pneumoniae SPNA45 (incomplete)
- Streptococcus pneumoniae TCH8431/19A (complete)
- Streptococcus pneumoniae TIGR4 (complete)
- Streptococcus pneumoniae TIGR4 (incomplete)
- Streptococcus pneumoniae Taiwan19F-14 (complete)
- Streptococcus pneumoniae str. Canada MDR_19A (incomplete)
- Streptococcus pneumoniae str. Canada MDR_19F (incomplete)
- Streptococcus pseudoporcinus SPIN 20026 (incomplete)
- Streptococcus pyogenes ATCC 10782 (incomplete)
- Streptococcus pyogenes M1 GAS (complete)
- Streptococcus pyogenes M49 591 (incomplete)
- Streptococcus pyogenes MGAS10270 (complete)
- Streptococcus pyogenes MGAS10394 (complete)
- Streptococcus pyogenes MGAS10750 (complete)
- Streptococcus pyogenes MGAS2096 (complete)
- Streptococcus pyogenes MGAS315 (complete)
- Streptococcus pyogenes MGAS5005 (complete)
- Streptococcus pyogenes MGAS6180 (complete)
- Streptococcus pyogenes MGAS8232 (complete)
- Streptococcus pyogenes MGAS9429 (complete)
- Streptococcus pyogenes NZ131 (complete)
- Streptococcus pyogenes SSI-1 (complete)
- Streptococcus pyogenes str. Manfredo (complete)
- Streptococcus salivarius SK126 (incomplete)
- Streptococcus sanguinis ATCC 49296 (incomplete)
- Streptococcus sanguinis SK36 (complete)
- Streptococcus sp. 2_1_36FAA (incomplete)
- Streptococcus sp. M143 (incomplete)
- Streptococcus sp. oral taxon 071 str. 73H25AP (incomplete)
- Streptococcus suis 05HAS68 (incomplete)
- Streptococcus suis 05ZYH33 (complete)
- Streptococcus suis 89/1591 (incomplete)
- Streptococcus suis 98HAH33 (complete)
- Streptococcus suis BM407 (complete)
- Streptococcus suis GZ1 (complete)
- Streptococcus suis P1/7 (complete)
- Streptococcus suis SC84 (complete)
- Streptococcus thermophilus CNRZ1066 (complete)
- Streptococcus thermophilus LMD-9 (complete)
- Streptococcus thermophilus LMG 18311 (complete)
- Streptococcus thermophilus ND03 (complete)
- Streptococcus uberis 0140J (complete)
- Streptococcus vestibularis F0396 (incomplete)
- Weissella cibaria KACC 11862 (incomplete)
- Weissella paramesenteroides ATCC 33313 (incomplete)