Neisseria
- Neisseria cinerea ATCC 14685 (incomplete)
- Neisseria elongata subsp. glycolytica ATCC 29315 (incomplete)
- Neisseria flavescens NRL30031/H210 (incomplete)
- Neisseria flavescens SK114 (incomplete)
- Neisseria gonorrhoeae 1291 (incomplete)
- Neisseria gonorrhoeae 35/02 (incomplete)
- Neisseria gonorrhoeae DGI18 (incomplete)
- Neisseria gonorrhoeae DGI2 (incomplete)
- Neisseria gonorrhoeae F62 (incomplete)
- Neisseria gonorrhoeae FA 1090 (complete)
- Neisseria gonorrhoeae FA19 (incomplete)
- Neisseria gonorrhoeae FA6140 (incomplete)
- Neisseria gonorrhoeae MS11 (incomplete)
- Neisseria gonorrhoeae NCCP11945 (complete)
- Neisseria gonorrhoeae PID1 (incomplete)
- Neisseria gonorrhoeae PID18 (incomplete)
- Neisseria gonorrhoeae PID24-1 (incomplete)
- Neisseria gonorrhoeae PID332 (incomplete)
- Neisseria gonorrhoeae SK-92-679 (incomplete)
- Neisseria gonorrhoeae SK-93-1035 (incomplete)
- Neisseria lactamica ATCC 23970 (incomplete)
- Neisseria lactamica NS19 (incomplete)
- Neisseria lactamica ST-640 (complete)
- Neisseria lactamica Y92-1009 (incomplete)
- Neisseria meningitidis 053442 (complete)
- Neisseria meningitidis 8013 (complete)
- Neisseria meningitidis ATCC 13091 (incomplete)
- Neisseria meningitidis FAM18 (complete)
- Neisseria meningitidis K1207 (incomplete)
- Neisseria meningitidis MC58 (complete)
- Neisseria meningitidis NS44 (incomplete)
- Neisseria meningitidis S0108 (incomplete)
- Neisseria meningitidis Z2491 (complete)
- Neisseria meningitidis alpha14 (complete)
- Neisseria meningitidis alpha710 (complete)
- Neisseria mucosa ATCC 25996 (incomplete)
- Neisseria polysaccharea ATCC 43768 (incomplete)
- Neisseria polysaccharea NS342 (incomplete)
- Neisseria sicca 4320 (incomplete)
- Neisseria sicca ATCC 29256 (incomplete)
- Neisseria sicca DS1 (incomplete)
- Neisseria sp. oral taxon 014 str. F0314 (incomplete)
- Neisseria subflava NJ9703 (incomplete)