Rickettsiales
- Anaplasma centrale str. Israel (complete)
- Anaplasma marginale str. Florida (complete)
- Anaplasma marginale str. Mississippi (incomplete)
- Anaplasma marginale str. Puerto Rico (incomplete)
- Anaplasma marginale str. St. Maries (complete)
- Anaplasma marginale str. Virginia (incomplete)
- Anaplasma phagocytophilum HZ (complete)
- Candidatus Pelagibacter sp. HTCC7211 (incomplete)
- Candidatus Pelagibacter ubique HTCC1002 (incomplete)
- Candidatus Pelagibacter ubique HTCC1062 (complete)
- Ehrlichia canis str. Jake (complete)
- Ehrlichia chaffeensis str. Arkansas (complete)
- Ehrlichia chaffeensis str. Sapulpa (incomplete)
- Ehrlichia ruminantium str. Gardel (complete)
- Ehrlichia ruminantium str. Welgevonden (complete)
- Ehrlichia ruminantium str. Welgevonden (complete)
- Neorickettsia risticii str. Illinois (complete)
- Neorickettsia sennetsu str. Miyayama (complete)
- Orientia tsutsugamushi str. Boryong (complete)
- Orientia tsutsugamushi str. Ikeda (complete)
- Rickettsia africae ESF-5 (complete)
- Rickettsia akari str. Hartford (complete)
- Rickettsia bellii OSU 85-389 (complete)
- Rickettsia bellii RML369-C (complete)
- Rickettsia canadensis str. McKiel (complete)
- Rickettsia conorii str. Malish 7 (complete)
- Rickettsia endosymbiont of Ixodes scapularis (incomplete)
- Rickettsia felis URRWXCal2 (complete)
- Rickettsia massiliae MTU5 (complete)
- Rickettsia peacockii str. Rustic (complete)
- Rickettsia prowazekii Rp22 (complete)
- Rickettsia prowazekii str. Madrid E (complete)
- Rickettsia rickettsii str. 'Sheila Smith' (complete)
- Rickettsia rickettsii str. Iowa (complete)
- Rickettsia sibirica 246 (incomplete)
- Rickettsia typhi str. Wilmington (complete)
- Wolbachia endosymbiont of Culex pipiens molestus str. wPip Mol (incomplete)
- Wolbachia endosymbiont of Culex quinquefasciatus JHB (incomplete)
- Wolbachia endosymbiont of Culex quinquefasciatus Pel (complete)
- Wolbachia endosymbiont of Drosophila ananassae (incomplete)
- Wolbachia endosymbiont of Drosophila melanogaster (complete)
- Wolbachia endosymbiont of Drosophila simulans (incomplete)
- Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 (incomplete)
- Wolbachia endosymbiont of Muscidifurax uniraptor (incomplete)
- Wolbachia endosymbiont strain TRS of Brugia malayi (complete)
- Wolbachia sp. wRi (complete)
- alpha proteobacterium HIMB114 (incomplete)